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Location:  Home > Details for node pal1
Type: Protein GRN ID: np08003 Name: pal1
Annotation: PAL1, ATPAL1 | PHE ammonia lyase 1 [EC:4.3.1.24]
Gene Locus: AT2G37040
Pathways: Salicylic acid;  Abscisic acid;  Ethylene 
Gene Expression (Affy ATH1 probeset): 263845_at    
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 Protein modification
 Protein-protein interaction
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 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 pal1  --  has product (in catalytic reaction)  --  Tans-Cinnamic acid
3 pal1  --  interacts with  --  AT3G59940
4 pal1  --  interacts with  --  AT3G15180
5 pal1  --  interacts with  --  pal4
6 pal1  --  interacts with  --  AT1G80440
7 pal1  --  interacts with  --  AT2G44130
8 pal1  --  interacts with  --  AT1G15670
9 pal1  --  is regulated by  --  PRHA
10 pal1  --  has similar expression pattern (mutual information value=0.815304) with  --  pal2
11 pal1  --  is a member of  --  pal2 family111, coding gene
12 pal1  --  has product (in catalytic reaction)  --  Tans-Cinnamic acid  --  has product (in catalytic reaction)  --  Cinnamoyl-CoA
13 pal1  --  has product (in catalytic reaction)  --  Tans-Cinnamic acid  --  has product (in catalytic reaction)  --  nitric oxide
14 pal1  --  has product (in catalytic reaction)  --  Tans-Cinnamic acid  --  has product (in catalytic reaction)  --  Benzaldehyde
15 pal1  --  has product (in catalytic reaction)  --  Tans-Cinnamic acid  --  has product (in catalytic reaction)  --  O-coumarate
16 pal1  --  has product (in catalytic reaction)  --  Tans-Cinnamic acid  --  has product (in catalytic reaction)  --  para-Coumaric acid
17 pal1  --  has product (in catalytic reaction)  --  Tans-Cinnamic acid  --  is product (in catalytic reaction) of  --  Phenylalanine
18 pal1  --  interacts with  --  AT3G59940  --  interacts with  --  ARR12
19 pal1  --  interacts with  --  AT3G59940  --  interacts with  --  ARR1
20 pal1  --  interacts with  --  AT3G15180  --  has similar expression pattern (mutual information value=0.813231) with  --  AT3G24255
21 pal1  --  interacts with  --  AT3G15180  --  has similar expression pattern (mutual information value=0.813231) with  --  AT3G23910
22 pal1  --  interacts with  --  pal4  --  interacts with  --  SP1L4
23 pal1  --  interacts with  --  AT1G80440  --  interacts with  --  ARR20
24 pal1  --  interacts with  --  AT2G44130  --  interacts with  --  ATFLS1; FLS; FLS1
25 pal1  --  interacts with  --  AT2G44130  --  interacts with  --  DFR; M318; TT3
26 pal1  --  interacts with  --  AT2G44130  --  interacts with  --  ANS; LDOX; TDS4; TT18
27 pal1  --  interacts with  --  AT2G44130  --  interacts with  --  ATCHS; CHS; TT4
28 pal1  --  interacts with  --  AT2G44130  --  interacts with  --  pal3
29 pal1  --  interacts with  --  AT2G44130  --  interacts with  --  ASK13; SK13
30 pal1  --  interacts with  --  AT2G44130  --  is the target gene of  --  ath-miR414
31 pal1  --  interacts with  --  AT1G15670  --  interacts with  --  PSAD-1
32 pal1  --  interacts with  --  AT1G15670  --  interacts with  --  ATSYP23; SYP23
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