Welcome to HRGRN: A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks

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	Welcome to HRGRN A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks

Location: Home > Details for node JAR1

Type: Protein	GRN ID: np07026	Name: JAR1
Annotation:	Mutant has reduced trichomes, anthocyanin, and seed coat mucilage and abnormally patterned stomates. Encodes a bHLH Transcription Factor 1. The protein is functionally redundant with GL3 and TT8 and interacts with TTG1, the myb proteins GL1, PAP1 and 2, C
Pathways:	Jasmonates
Gene Expression (Affy ATH1 probeset):

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Protein modification

Protein-protein interaction
also include predicted relationship

Compound-protein interaction

TF-target gene regulation

Small RNA-target regulation
also include predicted relationship

Carrier and transported molecule

Catalytic chemical reaction

Co-expressed gene pair
with mutual information value >

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Relationship type:	protein modification catalytic chemical reaction protein-protein interaction compound-protein interaction TF-target gene regulation small RNA-target regulation co-expressed gene pair carrier and transported molecule family/complex and member
Relationship evidence:	Solid line: validated Dashed line: predicted
Relationship direction:	Arrow: positive T shape: negative None arrow: unknown or n/a
Hormone association:	Thicker line: hormone related relationship : hormone related Node
Node type:	Transcription factor or transcriptional regulator Compound Kinase Small regulatory RNA (miRNA & ta-siRNA) Other nodes

No.	Path
2	JAR1 -- has product (in catalytic reaction) -- JA-L-Ile
3	JAR1 -- is regulated by -- ATWRKY70
4	JAR1 -- has product (in catalytic reaction) -- JA-L-Ile -- is a member of -- COI1 complex26
5	JAR1 -- has product (in catalytic reaction) -- JA-L-Ile -- is product (in catalytic reaction) of -- (+)-7-Isomethyljasmonate
6	JAR1 -- is regulated by -- ATWRKY70 -- regulates the expression of -- PDF1.2;LCR77
7	JAR1 -- is regulated by -- ATWRKY70 -- interacts with -- ATWRKY30; WRKY30
8	JAR1 -- is regulated by -- ATWRKY70 -- has similar expression pattern (mutual information value=0.800112) with -- AT1G19960
9	JAR1 -- is regulated by -- ATWRKY70 -- has similar expression pattern (mutual information value=1.00608) with -- AtWRKY54
10	JAR1 -- is regulated by -- ATWRKY70 -- is a member of -- AtWRKY54 family118, transcription factor gene

	Funding by the National Science Foundation	Funding by the Oklahoma Center for the Advancement of Science & Technology	Additional funding by the Samuel Roberts Noble Foundation

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