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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node pseudogene AtGA2ox5
Type: Protein GRN ID: np06015 Name: pseudogene AtGA2ox5
Annotation:
References:
  • Wang H, Tang W, Zhu C, Perry SE. A chromatin immunoprecipitation (ChIP) approach to isolate genes regulated by AGL15, a MADS domain protein that preferentially accumulates in embryos. Plant J. 2002 Dec;32(5):831-43. PubMed PMID: 12472697.
 
Pathways: Gibberellins 
Gene Expression (Affy ATH1 probeset):
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Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 pseudogene AtGA2ox5  --  is a member of  --  ATGA2OX2 family93, coding gene
3 pseudogene AtGA2ox5  --  is a member of  --  ATGA2OX2 family93, coding gene  --  has product (in catalytic reaction)  --  GA29
4 pseudogene AtGA2ox5  --  is a member of  --  ATGA2OX2 family93, coding gene  --  has product (in catalytic reaction)  --  GA8
5 pseudogene AtGA2ox5  --  is a member of  --  ATGA2OX2 family93, coding gene  --  has product (in catalytic reaction)  --  GA20
6 pseudogene AtGA2ox5  --  is a member of  --  ATGA2OX2 family93, coding gene  --  has product (in catalytic reaction)  --  GA19
7 pseudogene AtGA2ox5  --  is a member of  --  ATGA2OX2 family93, coding gene  --  has product (in catalytic reaction)  --  GA44
8 pseudogene AtGA2ox5  --  is a member of  --  ATGA2OX2 family93, coding gene  --  has product (in catalytic reaction)  --  GA51
9 pseudogene AtGA2ox5  --  is a member of  --  ATGA2OX2 family93, coding gene  --  has product (in catalytic reaction)  --  GA34
10 pseudogene AtGA2ox5  --  is a member of  --  ATGA2OX2 family93, coding gene  --  has family member  --  ATGA2OX1
11 pseudogene AtGA2ox5  --  is a member of  --  ATGA2OX2 family93, coding gene  --  has family member  --  ATGA2OX4
12 pseudogene AtGA2ox5  --  is a member of  --  ATGA2OX2 family93, coding gene  --  has family member  --  ATGA2OX3
13 pseudogene AtGA2ox5  --  is a member of  --  ATGA2OX2 family93, coding gene  --  has family member  --  ATGA2OX2
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