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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node HLS3
Type: Protein GRN ID: np05071 Name: HLS3
Annotation: SUR1, HLS3, RTY, ALF1, RTY1 | Tyrosine transaminase family protein
Gene Locus: AT2G20610
References:
  • Boerjan W, Cervera MT, Delarue M, Beeckman T, Dewitte W, Bellini C, Caboche M, Van Onckelen H, Van Montagu M, Inzé D. Superroot, a recessive mutation in Arabidopsis, confers auxin overproduction. Plant Cell. 1995 Sep;7(9):1405-19. PubMed PMID: 8589625; PubMed Central PMCID: PMC160963.
 
Pathways: Ethylene;  Auxins 
Gene Expression (Affy ATH1 probeset): 263714_at    
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 Protein modification
 Protein-protein interaction
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 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
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 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 HLS3  --  has similar expression pattern (mutual information value=1.05793) with  --  ATCB5-C; B5 #1; CB5-C
3 HLS3  --  has similar expression pattern (mutual information value=1.0571) with  --  ATSOT17; ATST5C; SOT17
4 HLS3  --  is a member of  --  ubiqitated GF5006, coding gene
5 HLS3  --  is a member of  --  Family81, coding gene
6 HLS3  --  has similar expression pattern (mutual information value=1.05793) with  --  ATCB5-C; B5 #1; CB5-C  --  interacts with  --  CER1
7 HLS3  --  has similar expression pattern (mutual information value=1.05793) with  --  ATCB5-C; B5 #1; CB5-C  --  interacts with  --  ATSUC4; ATSUT4; SUC4; SUT4
8 HLS3  --  has similar expression pattern (mutual information value=1.05793) with  --  ATCB5-C; B5 #1; CB5-C  --  transport  --  Lindane
9 HLS3  --  has similar expression pattern (mutual information value=1.05793) with  --  ATCB5-C; B5 #1; CB5-C  --  transport  --  beta-Sitosterol
10 HLS3  --  has similar expression pattern (mutual information value=1.05793) with  --  ATCB5-C; B5 #1; CB5-C  --  transport  --  Steroid
11 HLS3  --  has similar expression pattern (mutual information value=1.05793) with  --  ATCB5-C; B5 #1; CB5-C  --  transport  --  Cholesterol
12 HLS3  --  has similar expression pattern (mutual information value=1.05793) with  --  ATCB5-C; B5 #1; CB5-C  --  has similar expression pattern (mutual information value=0.985699) with  --  ATGSTF11; ATGSTF6; GSTF11
13 HLS3  --  has similar expression pattern (mutual information value=1.05793) with  --  ATCB5-C; B5 #1; CB5-C  --  has similar expression pattern (mutual information value=1.14755) with  --  CYP83A1; REF2
14 HLS3  --  has similar expression pattern (mutual information value=1.05793) with  --  ATCB5-C; B5 #1; CB5-C  --  has similar expression pattern (mutual information value=1.25478) with  --  AKN2; APK2
15 HLS3  --  has similar expression pattern (mutual information value=1.05793) with  --  ATCB5-C; B5 #1; CB5-C  --  has similar expression pattern (mutual information value=0.807034) with  --  AT5G44720
16 HLS3  --  has similar expression pattern (mutual information value=1.0571) with  --  ATSOT17; ATST5C; SOT17  --  has similar expression pattern (mutual information value=0.91555) with  --  ATGSTF7; ATGSTF9; GLUTTR; GSTF9
17 HLS3  --  has similar expression pattern (mutual information value=1.0571) with  --  ATSOT17; ATST5C; SOT17  --  has similar expression pattern (mutual information value=1.43397) with  --  ATSOT18; ATST5B; SOT18
18 HLS3  --  has similar expression pattern (mutual information value=1.0571) with  --  ATSOT17; ATST5C; SOT17  --  has similar expression pattern (mutual information value=1.36944) with  --  BASS5; BAT5
19 HLS3  --  has similar expression pattern (mutual information value=1.0571) with  --  ATSOT17; ATST5C; SOT17  --  has similar expression pattern (mutual information value=1.28359) with  --  IPMI1
20 HLS3  --  has similar expression pattern (mutual information value=1.0571) with  --  ATSOT17; ATST5C; SOT17  --  has similar expression pattern (mutual information value=1.07586) with  --  AtMYB28; HAG1; MYB28; PMG1
21 HLS3  --  is a member of  --  ubiqitated GF5006, coding gene  --  has family member  --  COP3
22 HLS3  --  is a member of  --  ubiqitated GF5006, coding gene  --  has family member  --  COP2/AMP1
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