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Location:  Home > Details for node CRF3
Type: Protein GRN ID: np04071 Name: CRF3
Annotation: CRF3 | cytokinin response factor 3
Gene Locus: AT5G53290
Transcription factor /
transcriptional regulator:		 transcription factor family AP2-EREBP
References:
  • Cutcliffe JW, Hellmann E, Heyl A, Rashotte AM. CRFs form protein-protein interactions with each other and with members of the cytokinin signalling pathway in Arabidopsis via the CRF domain. J Exp Bot. 2011 Oct;62(14):4995-5002. doi: 10.1093/jxb/err199. Epub 2011 Jun 24. PubMed PMID: 21705390; PubMed Central PMCID: PMC3193008.
 
Pathways: Cytokinins 
Gene Expression (Affy ATH1 probeset): 248253_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
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 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 CRF3  --  interacts with  --  AHP5
3 CRF3  --  interacts with  --  AHP4
4 CRF3  --  interacts with  --  AHP3
5 CRF3  --  interacts with  --  AHP1
6 CRF3  --  interacts with  --  CRF7
7 CRF3  --  interacts with  --  CRF8
8 CRF3  --  interacts with  --  CRF6
9 CRF3  --  interacts with  --  CRF5
10 CRF3  --  interacts with  --  CRF4
11 CRF3  --  interacts with  --  CRF2
12 CRF3  --  interacts with  --  CRF1
13 CRF3  --  is a member of  --  CRF1 family74, transcription factor gene
14 CRF3  --  interacts with  --  AHP5  --  interacts with  --  ATUPS1; UPS1
15 CRF3  --  interacts with  --  AHP5  --  interacts with  --  AT3G02065
16 CRF3  --  interacts with  --  AHP5  --  interacts with  --  ARR1
17 CRF3  --  interacts with  --  AHP5  --  interacts with  --  ARR4
18 CRF3  --  interacts with  --  AHP5  --  interacts with  --  ATMYC2
19 CRF3  --  interacts with  --  AHP5  --  interacts with  --  AT4G14815
20 CRF3  --  interacts with  --  AHP5  --  interacts with  --  CKI1
21 CRF3  --  interacts with  --  AHP5  --  interacts with  --  AHK5; CKI2; HK5
22 CRF3  --  interacts with  --  AHP5  --  interacts with  --  ARR22
23 CRF3  --  interacts with  --  AHP5  --  is a member of  --  AHP1 family68, coding gene
24 CRF3  --  interacts with  --  AHP5  --  is a member of  --  AHP1 family66, coding gene
25 CRF3  --  interacts with  --  AHP3  --  interacts with  --  TCP10
26 CRF3  --  interacts with  --  AHP3  --  interacts with  --  ARR2
27 CRF3  --  interacts with  --  AHP3  --  interacts with  --  ARR9
28 CRF3  --  interacts with  --  AHP3  --  interacts with  --  ARR8
29 CRF3  --  interacts with  --  AHP3  --  interacts with  --  ARR7
30 CRF3  --  interacts with  --  AHP3  --  interacts with  --  ARR5
31 CRF3  --  interacts with  --  AHP3  --  interacts with  --  ARR3
32 CRF3  --  interacts with  --  AHP3  --  interacts with  --  AHK2
33 CRF3  --  interacts with  --  AHP1  --  interacts with  --  ATELF5A-2; ELF5A-2; FBR12
34 CRF3  --  interacts with  --  AHP1  --  interacts with  --  CKI1; CKL11
35 CRF3  --  interacts with  --  AHP1  --  interacts with  --  ETR1
36 CRF3  --  interacts with  --  AHP1  --  interacts with  --  AHK1; ATHK1; HK1
37 CRF3  --  interacts with  --  AHP1  --  has similar expression pattern (mutual information value=0.804269) with  --  AT2G38380
38 CRF3  --  interacts with  --  AHP1  --  has similar expression pattern (mutual information value=0.804269) with  --  AT2G38390
39 CRF3  --  interacts with  --  AHP1  --  has similar expression pattern (mutual information value=0.869634) with  --  ZIP3
40 CRF3  --  interacts with  --  AHP1  --  has similar expression pattern (mutual information value=0.87074) with  --  AT1G30870
41 CRF3  --  interacts with  --  AHP1  --  has similar expression pattern (mutual information value=0.802155) with  --  AT1G14960
42 CRF3  --  interacts with  --  AHP1  --  has similar expression pattern (mutual information value=0.885296) with  --  AtGH9C1; GH9C1
43 CRF3  --  interacts with  --  AHP1  --  has similar expression pattern (mutual information value=0.818454) with  --  ATEXT3; EXT3; RSH
44 CRF3  --  interacts with  --  AHP1  --  has similar expression pattern (mutual information value=0.903033) with  --  AT3G25930
45 CRF3  --  interacts with  --  AHP1  --  has similar expression pattern (mutual information value=0.869435) with  --  RHS13
46 CRF3  --  interacts with  --  AHP1  --  has similar expression pattern (mutual information value=0.844871) with  --  AT4G12545
47 CRF3  --  interacts with  --  AHP1  --  has similar expression pattern (mutual information value=0.844871) with  --  AIR1
48 CRF3  --  interacts with  --  AHP1  --  has similar expression pattern (mutual information value=0.871932) with  --  AT4G22212
49 CRF3  --  interacts with  --  AHP1  --  has similar expression pattern (mutual information value=0.853437) with  --  AT4G26010
50 CRF3  --  interacts with  --  AHP1  --  has similar expression pattern (mutual information value=0.846641) with  --  AT4G26220
51 CRF3  --  interacts with  --  AHP1  --  has similar expression pattern (mutual information value=0.856675) with  --  AT4G38080
52 CRF3  --  interacts with  --  AHP1  --  has similar expression pattern (mutual information value=0.832831) with  --  AT5G05500
53 CRF3  --  interacts with  --  AHP1  --  has similar expression pattern (mutual information value=0.908127) with  --  AT5G23840
54 CRF3  --  interacts with  --  AHP1  --  has similar expression pattern (mutual information value=0.876524) with  --  AT5G23830
55 CRF3  --  interacts with  --  AHP1  --  has similar expression pattern (mutual information value=0.952507) with  --  AT5G42510
56 CRF3  --  interacts with  --  AHP1  --  has similar expression pattern (mutual information value=0.952507) with  --  AT5G42500
57 CRF3  --  interacts with  --  AHP1  --  has similar expression pattern (mutual information value=0.953894) with  --  LCR74; PDF2.5
58 CRF3  --  interacts with  --  AHP1  --  is a member of  --  AHP1 family67, coding gene
59 CRF3  --  interacts with  --  AHP1  --  is modified by  --  MPK16
60 CRF3  --  interacts with  --  CRF7  --  interacts with  --  AHP2
61 CRF3  --  interacts with  --  CRF7  --  has similar expression pattern (mutual information value=0.872017) with  --  ENR1; MOD1
62 CRF3  --  interacts with  --  CRF7  --  has similar expression pattern (mutual information value=0.848578) with  --  AT2G27480
63 CRF3  --  interacts with  --  CRF7  --  has similar expression pattern (mutual information value=0.859484) with  --  AT2G20410
64 CRF3  --  interacts with  --  CRF7  --  has similar expression pattern (mutual information value=0.998745) with  --  VHA-A
65 CRF3  --  interacts with  --  CRF7  --  has similar expression pattern (mutual information value=0.864908) with  --  AT1G09320
66 CRF3  --  interacts with  --  CRF7  --  has similar expression pattern (mutual information value=0.828648) with  --  WRKY4
67 CRF3  --  interacts with  --  CRF7  --  has similar expression pattern (mutual information value=0.801488) with  --  AT1G53520
68 CRF3  --  interacts with  --  CRF7  --  has similar expression pattern (mutual information value=0.813183) with  --  AT3G10020
69 CRF3  --  interacts with  --  CRF7  --  has similar expression pattern (mutual information value=0.809599) with  --  ASIL2
70 CRF3  --  interacts with  --  CRF7  --  has similar expression pattern (mutual information value=0.830308) with  --  AT4G02880
71 CRF3  --  interacts with  --  CRF7  --  has similar expression pattern (mutual information value=0.990684) with  --  ARI1; ATARI1
72 CRF3  --  interacts with  --  CRF7  --  has similar expression pattern (mutual information value=0.834486) with  --  XTH7
73 CRF3  --  interacts with  --  CRF7  --  has similar expression pattern (mutual information value=0.895249) with  --  AT5G01350
74 CRF3  --  interacts with  --  CRF7  --  has similar expression pattern (mutual information value=0.87304) with  --  AT5G04760
75 CRF3  --  interacts with  --  CRF7  --  has similar expression pattern (mutual information value=1.15645) with  --  AT5G08535
76 CRF3  --  interacts with  --  CRF7  --  has similar expression pattern (mutual information value=0.943285) with  --  DiT1
77 CRF3  --  interacts with  --  CRF7  --  has similar expression pattern (mutual information value=0.846832) with  --  AT5G62910
78 CRF3  --  interacts with  --  CRF7  --  has similar expression pattern (mutual information value=0.849593) with  --  AT5G24870
79 CRF3  --  interacts with  --  CRF7  --  has similar expression pattern (mutual information value=1.13595) with  --  SBP1
80 CRF3  --  interacts with  --  CRF7  --  has similar expression pattern (mutual information value=0.915965) with  --  AT1G25988
81 CRF3  --  interacts with  --  CRF7  --  has similar expression pattern (mutual information value=0.915965) with  --  AT1G25682
82 CRF3  --  interacts with  --  CRF7  --  has similar expression pattern (mutual information value=0.818632) with  --  ATE2FB; E2F1; E2FB
83 CRF3  --  interacts with  --  CRF6  --  interacts with  --  ARR10
84 CRF3  --  interacts with  --  CRF6  --  interacts with  --  ARR1 family72, response regulator and putative novel transcription factor gene
85 CRF3  --  interacts with  --  CRF6  --  interacts with  --  ATSWI3B?
86 CRF3  --  interacts with  --  CRF2  --  interacts with  --  ARR12
87 CRF3  --  interacts with  --  CRF2  --  is the target gene of  --  ath-miR5641
88 CRF3  --  interacts with  --  CRF1  --  interacts with  --  HY5
89 CRF3  --  is a member of  --  CRF1 family74, transcription factor gene  --  is a member of  --  CRF complex19
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