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Location:  Home > Details for node CRF2
Type: Protein GRN ID: np04070 Name: CRF2
Annotation: CRF2, TMO3 | cytokinin response factor 2
Gene Locus: AT4G23750
Transcription factor /
transcriptional regulator:		 transcription factor family AP2-EREBP
References:
  • Cutcliffe JW, Hellmann E, Heyl A, Rashotte AM. CRFs form protein-protein interactions with each other and with members of the cytokinin signalling pathway in Arabidopsis via the CRF domain. J Exp Bot. 2011 Oct;62(14):4995-5002. doi: 10.1093/jxb/err199. Epub 2011 Jun 24. PubMed PMID: 21705390; PubMed Central PMCID: PMC3193008.
 
Pathways: Cytokinins 
Gene Expression (Affy ATH1 probeset): 254235_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
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 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 CRF2  --  interacts with  --  ARR12
3 CRF2  --  interacts with  --  ARR7
4 CRF2  --  interacts with  --  AHP5
5 CRF2  --  interacts with  --  AHP4
6 CRF2  --  interacts with  --  AHP3
7 CRF2  --  interacts with  --  AHP1
8 CRF2  --  interacts with  --  CRF7
9 CRF2  --  interacts with  --  CRF8
10 CRF2  --  interacts with  --  CRF6
11 CRF2  --  interacts with  --  CRF5
12 CRF2  --  interacts with  --  CRF4
13 CRF2  --  interacts with  --  CRF3
14 CRF2  --  interacts with  --  CRF1
15 CRF2  --  interacts with  --  ARR1 family72, response regulator and putative novel transcription factor gene
16 CRF2  --  is the target gene of  --  ath-miR5641
17 CRF2  --  is a member of  --  CRF1 family74, transcription factor gene
18 CRF2  --  interacts with  --  ARR12  --  regulates the expression of   --  ATPIN1
19 CRF2  --  interacts with  --  ARR12  --  regulates the expression of   --  IAA3
20 CRF2  --  interacts with  --  ARR12  --  is regulated by  --  RGA1 family99, transcription factor gene
21 CRF2  --  interacts with  --  ARR12  --  is a member of  --  ARR1 family70, response regulator and putative novel transcription factor gene
22 CRF2  --  interacts with  --  ARR12  --  interacts with  --  AT3G59940
23 CRF2  --  interacts with  --  ARR12  --  interacts with  --  AT2G44130
24 CRF2  --  interacts with  --  ARR12  --  interacts with  --  AT1G15670
25 CRF2  --  interacts with  --  ARR12  --  interacts with  --  AT1G80440
26 CRF2  --  interacts with  --  ARR7  --  interacts with  --  AT5G08720
27 CRF2  --  interacts with  --  ARR7  --  interacts with  --  LSH3; OBO1
28 CRF2  --  interacts with  --  ARR7  --  interacts with  --  CRWN3; LINC3
29 CRF2  --  interacts with  --  ARR7  --  interacts with  --  NAP1;2; NFA02; NFA2
30 CRF2  --  interacts with  --  ARR7  --  interacts with  --  AT5G48630
31 CRF2  --  interacts with  --  ARR7  --  interacts with  --  AZF3; ZF3
32 CRF2  --  interacts with  --  ARR7  --  interacts with  --  atnudt3; NUDT3
33 CRF2  --  interacts with  --  ARR7  --  interacts with  --  BIP; BIP2
34 CRF2  --  interacts with  --  ARR7  --  interacts with  --  AHP2
35 CRF2  --  interacts with  --  ARR7  --  is a member of  --  ARR3 family69, response regulator and putative novel transcription factor gene
36 CRF2  --  interacts with  --  ARR7  --  is a member of  --  ARR3 family73, response regulator and putative novel transcription factor gene
37 CRF2  --  interacts with  --  ARR7  --  is regulated by  --  ARF5
38 CRF2  --  interacts with  --  ARR7  --  is regulated by  --  PGA6; WUS; WUS1
39 CRF2  --  interacts with  --  AHP5  --  interacts with  --  ATUPS1; UPS1
40 CRF2  --  interacts with  --  AHP5  --  interacts with  --  AT3G02065
41 CRF2  --  interacts with  --  AHP5  --  interacts with  --  ARR1
42 CRF2  --  interacts with  --  AHP5  --  interacts with  --  ARR4
43 CRF2  --  interacts with  --  AHP5  --  interacts with  --  ATMYC2
44 CRF2  --  interacts with  --  AHP5  --  interacts with  --  AT4G14815
45 CRF2  --  interacts with  --  AHP5  --  interacts with  --  CKI1
46 CRF2  --  interacts with  --  AHP5  --  interacts with  --  AHK5; CKI2; HK5
47 CRF2  --  interacts with  --  AHP5  --  interacts with  --  ARR22
48 CRF2  --  interacts with  --  AHP5  --  is a member of  --  AHP1 family68, coding gene
49 CRF2  --  interacts with  --  AHP5  --  is a member of  --  AHP1 family66, coding gene
50 CRF2  --  interacts with  --  AHP3  --  interacts with  --  TCP10
51 CRF2  --  interacts with  --  AHP3  --  interacts with  --  ARR2
52 CRF2  --  interacts with  --  AHP3  --  interacts with  --  ARR9
53 CRF2  --  interacts with  --  AHP3  --  interacts with  --  ARR8
54 CRF2  --  interacts with  --  AHP3  --  interacts with  --  ARR5
55 CRF2  --  interacts with  --  AHP3  --  interacts with  --  ARR3
56 CRF2  --  interacts with  --  AHP3  --  interacts with  --  AHK2
57 CRF2  --  interacts with  --  AHP1  --  interacts with  --  ATELF5A-2; ELF5A-2; FBR12
58 CRF2  --  interacts with  --  AHP1  --  interacts with  --  CKI1; CKL11
59 CRF2  --  interacts with  --  AHP1  --  interacts with  --  ETR1
60 CRF2  --  interacts with  --  AHP1  --  interacts with  --  AHK1; ATHK1; HK1
61 CRF2  --  interacts with  --  AHP1  --  has similar expression pattern (mutual information value=0.804269) with  --  AT2G38380
62 CRF2  --  interacts with  --  AHP1  --  has similar expression pattern (mutual information value=0.804269) with  --  AT2G38390
63 CRF2  --  interacts with  --  AHP1  --  has similar expression pattern (mutual information value=0.869634) with  --  ZIP3
64 CRF2  --  interacts with  --  AHP1  --  has similar expression pattern (mutual information value=0.87074) with  --  AT1G30870
65 CRF2  --  interacts with  --  AHP1  --  has similar expression pattern (mutual information value=0.802155) with  --  AT1G14960
66 CRF2  --  interacts with  --  AHP1  --  has similar expression pattern (mutual information value=0.885296) with  --  AtGH9C1; GH9C1
67 CRF2  --  interacts with  --  AHP1  --  has similar expression pattern (mutual information value=0.818454) with  --  ATEXT3; EXT3; RSH
68 CRF2  --  interacts with  --  AHP1  --  has similar expression pattern (mutual information value=0.903033) with  --  AT3G25930
69 CRF2  --  interacts with  --  AHP1  --  has similar expression pattern (mutual information value=0.869435) with  --  RHS13
70 CRF2  --  interacts with  --  AHP1  --  has similar expression pattern (mutual information value=0.844871) with  --  AT4G12545
71 CRF2  --  interacts with  --  AHP1  --  has similar expression pattern (mutual information value=0.844871) with  --  AIR1
72 CRF2  --  interacts with  --  AHP1  --  has similar expression pattern (mutual information value=0.871932) with  --  AT4G22212
73 CRF2  --  interacts with  --  AHP1  --  has similar expression pattern (mutual information value=0.853437) with  --  AT4G26010
74 CRF2  --  interacts with  --  AHP1  --  has similar expression pattern (mutual information value=0.846641) with  --  AT4G26220
75 CRF2  --  interacts with  --  AHP1  --  has similar expression pattern (mutual information value=0.856675) with  --  AT4G38080
76 CRF2  --  interacts with  --  AHP1  --  has similar expression pattern (mutual information value=0.832831) with  --  AT5G05500
77 CRF2  --  interacts with  --  AHP1  --  has similar expression pattern (mutual information value=0.908127) with  --  AT5G23840
78 CRF2  --  interacts with  --  AHP1  --  has similar expression pattern (mutual information value=0.876524) with  --  AT5G23830
79 CRF2  --  interacts with  --  AHP1  --  has similar expression pattern (mutual information value=0.952507) with  --  AT5G42510
80 CRF2  --  interacts with  --  AHP1  --  has similar expression pattern (mutual information value=0.952507) with  --  AT5G42500
81 CRF2  --  interacts with  --  AHP1  --  has similar expression pattern (mutual information value=0.953894) with  --  LCR74; PDF2.5
82 CRF2  --  interacts with  --  AHP1  --  is a member of  --  AHP1 family67, coding gene
83 CRF2  --  interacts with  --  AHP1  --  is modified by  --  MPK16
84 CRF2  --  interacts with  --  CRF7  --  has similar expression pattern (mutual information value=0.872017) with  --  ENR1; MOD1
85 CRF2  --  interacts with  --  CRF7  --  has similar expression pattern (mutual information value=0.848578) with  --  AT2G27480
86 CRF2  --  interacts with  --  CRF7  --  has similar expression pattern (mutual information value=0.859484) with  --  AT2G20410
87 CRF2  --  interacts with  --  CRF7  --  has similar expression pattern (mutual information value=0.998745) with  --  VHA-A
88 CRF2  --  interacts with  --  CRF7  --  has similar expression pattern (mutual information value=0.864908) with  --  AT1G09320
89 CRF2  --  interacts with  --  CRF7  --  has similar expression pattern (mutual information value=0.828648) with  --  WRKY4
90 CRF2  --  interacts with  --  CRF7  --  has similar expression pattern (mutual information value=0.801488) with  --  AT1G53520
91 CRF2  --  interacts with  --  CRF7  --  has similar expression pattern (mutual information value=0.813183) with  --  AT3G10020
92 CRF2  --  interacts with  --  CRF7  --  has similar expression pattern (mutual information value=0.809599) with  --  ASIL2
93 CRF2  --  interacts with  --  CRF7  --  has similar expression pattern (mutual information value=0.830308) with  --  AT4G02880
94 CRF2  --  interacts with  --  CRF7  --  has similar expression pattern (mutual information value=0.990684) with  --  ARI1; ATARI1
95 CRF2  --  interacts with  --  CRF7  --  has similar expression pattern (mutual information value=0.834486) with  --  XTH7
96 CRF2  --  interacts with  --  CRF7  --  has similar expression pattern (mutual information value=0.895249) with  --  AT5G01350
97 CRF2  --  interacts with  --  CRF7  --  has similar expression pattern (mutual information value=0.87304) with  --  AT5G04760
98 CRF2  --  interacts with  --  CRF7  --  has similar expression pattern (mutual information value=1.15645) with  --  AT5G08535
99 CRF2  --  interacts with  --  CRF7  --  has similar expression pattern (mutual information value=0.943285) with  --  DiT1
100 CRF2  --  interacts with  --  CRF7  --  has similar expression pattern (mutual information value=0.846832) with  --  AT5G62910
101 CRF2  --  interacts with  --  CRF7  --  has similar expression pattern (mutual information value=0.849593) with  --  AT5G24870
102 CRF2  --  interacts with  --  CRF7  --  has similar expression pattern (mutual information value=1.13595) with  --  SBP1
103 CRF2  --  interacts with  --  CRF7  --  has similar expression pattern (mutual information value=0.915965) with  --  AT1G25988
104 CRF2  --  interacts with  --  CRF7  --  has similar expression pattern (mutual information value=0.915965) with  --  AT1G25682
105 CRF2  --  interacts with  --  CRF7  --  has similar expression pattern (mutual information value=0.818632) with  --  ATE2FB; E2F1; E2FB
106 CRF2  --  interacts with  --  CRF6  --  interacts with  --  ARR10
107 CRF2  --  interacts with  --  CRF6  --  interacts with  --  ATSWI3B?
108 CRF2  --  interacts with  --  CRF1  --  interacts with  --  HY5
109 CRF2  --  interacts with  --  ARR1 family72, response regulator and putative novel transcription factor gene  --  interacts with  --  ATCKX1 family61, coding gene
110 CRF2  --  interacts with  --  ARR1 family72, response regulator and putative novel transcription factor gene  --  interacts with  --  CYCD3;2
111 CRF2  --  interacts with  --  ARR1 family72, response regulator and putative novel transcription factor gene  --  interacts with  --  CYCD3;3
112 CRF2  --  interacts with  --  ARR1 family72, response regulator and putative novel transcription factor gene  --  interacts with  --  CYCD3; CYCD3;1
113 CRF2  --  interacts with  --  ARR1 family72, response regulator and putative novel transcription factor gene  --  has family member  --  ARR21
114 CRF2  --  interacts with  --  ARR1 family72, response regulator and putative novel transcription factor gene  --  has family member  --  ARR20
115 CRF2  --  interacts with  --  ARR1 family72, response regulator and putative novel transcription factor gene  --  has family member  --  ARR19
116 CRF2  --  interacts with  --  ARR1 family72, response regulator and putative novel transcription factor gene  --  has family member  --  ARR18
117 CRF2  --  interacts with  --  ARR1 family72, response regulator and putative novel transcription factor gene  --  has family member  --  ARR14
118 CRF2  --  interacts with  --  ARR1 family72, response regulator and putative novel transcription factor gene  --  has family member  --  ARR13
119 CRF2  --  interacts with  --  ARR1 family72, response regulator and putative novel transcription factor gene  --  has family member  --  ARR11
120 CRF2  --  is the target gene of  --  ath-miR5641  --  inhibit the expression of  --  AT5G64500
121 CRF2  --  is the target gene of  --  ath-miR5641  --  inhibit the expression of  --  AT5G58320
122 CRF2  --  is the target gene of  --  ath-miR5641  --  inhibit the expression of  --  AT5G51850
123 CRF2  --  is the target gene of  --  ath-miR5641  --  inhibit the expression of  --  AT4G24830
124 CRF2  --  is the target gene of  --  ath-miR5641  --  inhibit the expression of  --  AT3G59670
125 CRF2  --  is the target gene of  --  ath-miR5641  --  inhibit the expression of  --  AT3G55470
126 CRF2  --  is the target gene of  --  ath-miR5641  --  inhibit the expression of  --  AT2G38790
127 CRF2  --  is the target gene of  --  ath-miR5641  --  inhibit the expression of  --  AT2G07620
128 CRF2  --  is the target gene of  --  ath-miR5641  --  inhibit the expression of  --  AT1G77680
129 CRF2  --  is the target gene of  --  ath-miR5641  --  inhibit the expression of  --  DHNS; ECHID
130 CRF2  --  is the target gene of  --  ath-miR5641  --  inhibit the expression of  --  AT1G54450
131 CRF2  --  is the target gene of  --  ath-miR5641  --  inhibit the expression of  --  AT1G22680
132 CRF2  --  is a member of  --  CRF1 family74, transcription factor gene  --  is a member of  --  CRF complex19
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