Welcome to HRGRN: A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks

	Screen Resolution:
	Welcome to HRGRN A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks

Location: Home > Details for node ATIPT6

Type: Protein	GRN ID: np04006	Name: ATIPT6
Annotation:	ATIPT6, IPT6 \| isopentenyltransferase 6
Gene Locus:	AT1G25410
References:	Miyawaki K, Tarkowski P, Matsumoto-Kitano M, Kato T, Sato S, Tarkowska D, Tabata S, Sandberg G, Kakimoto T. Roles of Arabidopsis ATP/ADP isopentenyltransferases and tRNA isopentenyltransferases in cytokinin biosynthesis. Proc Natl Acad Sci U S A. 2006 Oct 31;103(44):16598-603. Epub 2006 Oct 24. PubMed PMID: 17062755; PubMed Central PMCID: PMC1637627.
Pathways:	Cytokinins
Gene Expression (Affy ATH1 probeset):	255741_at

Choose color for highlight:

Display edge: validated and predicted
Display node/edge prompt:
Layout:
as format

Protein modification

Protein-protein interaction
also include predicted relationship

Compound-protein interaction

TF-target gene regulation

Small RNA-target regulation
also include predicted relationship

Carrier and transported molecule

Catalytic chemical reaction

Co-expressed gene pair
with mutual information value >

Ignore nodes having > relationships

Relationship type:	protein modification catalytic chemical reaction protein-protein interaction compound-protein interaction TF-target gene regulation small RNA-target regulation co-expressed gene pair carrier and transported molecule family/complex and member
Relationship evidence:	Solid line: validated Dashed line: predicted
Relationship direction:	Arrow: positive T shape: negative None arrow: unknown or n/a
Hormone association:	Thicker line: hormone related relationship : hormone related Node
Node type:	Transcription factor or transcriptional regulator Compound Kinase Small regulatory RNA (miRNA & ta-siRNA) Other nodes

No.	Path
2	ATIPT6 -- is a member of -- ATIPT1 family54, coding gene
3	ATIPT6 -- is a member of -- ATIPT1 family54, coding gene -- has product (in catalytic reaction) -- iPRMP
4	ATIPT6 -- is a member of -- ATIPT1 family54, coding gene -- has product (in catalytic reaction) -- iPRDP
5	ATIPT6 -- is a member of -- ATIPT1 family54, coding gene -- has product (in catalytic reaction) -- Iprtp
6	ATIPT6 -- is a member of -- ATIPT1 family54, coding gene -- is regulated by -- IAA3
7	ATIPT6 -- is a member of -- ATIPT1 family54, coding gene -- has family member -- ATIPT7
8	ATIPT6 -- is a member of -- ATIPT1 family54, coding gene -- has family member -- ATIPT5
9	ATIPT6 -- is a member of -- ATIPT1 family54, coding gene -- has family member -- ATIPT3
10	ATIPT6 -- is a member of -- ATIPT1 family54, coding gene -- has family member -- ATIPT1

	Funding by the National Science Foundation	Funding by the Oklahoma Center for the Advancement of Science & Technology	Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab Disclaimer \| Contact