Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node ABA3
Type: Protein GRN ID: np03003 Name: ABA3
Annotation: SIR3, LOS5, ABA3, ATABA3, ACI2 | molybdenum cofactor sulfurase (LOS5) (ABA3) [EC:2.8.1.9]
Gene Locus: AT1G16540
References:
  • Xiong L, Ishitani M, Lee H, Zhu JK. The Arabidopsis LOS5/ABA3 locus encodes a molybdenum cofactor sulfurase and modulates cold stress- and osmotic stress-responsive gene expression. Plant Cell. 2001 Sep;13(9):2063-83. PubMed PMID: 11549764; PubMed Central PMCID: PMC139452.
  • Schwartz SH, Qin X, Zeevaart JA. Elucidation of the indirect pathway of abscisic acid biosynthesis by mutants, genes, and enzymes. Plant Physiol. 2003 Apr;131(4):1591-601. Review. PubMed PMID: 12692318; PubMed Central PMCID: PMC1540303.
 
Pathways: Abscisic acid 
Gene Expression (Affy ATH1 probeset): 246325_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 ABA3  --  interacts with  --  SAD1
3 ABA3  --  is a member of  --  ABA3 family42, coding gene
4 ABA3  --  interacts with  --  SAD1  --  has similar expression pattern (mutual information value=0.945645) with  --  AT2G40765
5 ABA3  --  interacts with  --  SAD1  --  has similar expression pattern (mutual information value=0.863875) with  --  AT1G05205
6 ABA3  --  interacts with  --  SAD1  --  has similar expression pattern (mutual information value=0.994361) with  --  AT2G31725
7 ABA3  --  interacts with  --  SAD1  --  has similar expression pattern (mutual information value=0.835531) with  --  AT1G15470
8 ABA3  --  interacts with  --  SAD1  --  has similar expression pattern (mutual information value=0.853013) with  --  AT1G16000
9 ABA3  --  interacts with  --  SAD1  --  has similar expression pattern (mutual information value=1.03766) with  --  AT2G43780
10 ABA3  --  interacts with  --  SAD1  --  has similar expression pattern (mutual information value=0.975677) with  --  AT3G07590
11 ABA3  --  interacts with  --  SAD1  --  has similar expression pattern (mutual information value=0.879154) with  --  FKBP15-1
12 ABA3  --  interacts with  --  SAD1  --  has similar expression pattern (mutual information value=0.965049) with  --  AT3G13845
13 ABA3  --  interacts with  --  SAD1  --  has similar expression pattern (mutual information value=0.991409) with  --  AT4G22000
14 ABA3  --  interacts with  --  SAD1  --  has similar expression pattern (mutual information value=0.836692) with  --  ATMND1
15 ABA3  --  interacts with  --  SAD1  --  has similar expression pattern (mutual information value=0.984014) with  --  rps15ae
16 ABA3  --  interacts with  --  SAD1  --  has similar expression pattern (mutual information value=1.02801) with  --  emb2474; TIM9
17 ABA3  --  interacts with  --  SAD1  --  has similar expression pattern (mutual information value=0.945386) with  --  ATDSS1(V); DSS1(V)
18 ABA3  --  interacts with  --  SAD1  --  has similar expression pattern (mutual information value=1.08122) with  --  AT5G61310
19 ABA3  --  interacts with  --  SAD1  --  has similar expression pattern (mutual information value=0.9165) with  --  AT4G37090
20 ABA3  --  is a member of  --  ABA3 family42, coding gene  --  has family member  --  AAO3
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact