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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AFB3
Type: Protein GRN ID: np02056 Name: AFB3
Annotation: AFB3 | auxin signaling F-box 3
Gene Locus: AT1G12820
References:
  • Dharmasiri N, Dharmasiri S, Weijers D, Lechner E, Yamada M, Hobbie L, Ehrismann JS, Jürgens G, Estelle M. Plant development is regulated by a family of auxin receptor F box proteins. Dev Cell. 2005 Jul;9(1):109-19. PubMed PMID: 15992545.
 
Pathways: Auxins;  Gibberellins 
Gene Expression (Affy ATH1 probeset): 261195_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AFB3  --  interacts with  --  AFB1
3 AFB3  --  interacts with  --  AFB2
4 AFB3  --  interacts with  --  TIR1
5 AFB3  --  interacts with  --  BDL
6 AFB3  --  interacts with  --  AXR2
7 AFB3  --  is the target gene of  --  ath-miR393b
8 AFB3  --  is the target gene of  --  ath-miR393a
9 AFB3  --  is a member of  --  TIR1 family31, coding gene
10 AFB3  --  interacts with  --  AFB1  --  interacts with  --  IAA28
11 AFB3  --  interacts with  --  AFB1  --  interacts with  --  IAA29
12 AFB3  --  interacts with  --  AFB1  --  interacts with  --  IAA8
13 AFB3  --  interacts with  --  AFB1  --  interacts with  --  ATAUX2-27; AUX2-27; IAA5
14 AFB3  --  interacts with  --  AFB1  --  interacts with  --  IAA3
15 AFB3  --  interacts with  --  AFB1  --  interacts with  --  BOI; RING
16 AFB3  --  interacts with  --  AFB1  --  interacts with  --  AT2G42390
17 AFB3  --  interacts with  --  AFB1  --  interacts with  --  RCE1
18 AFB3  --  interacts with  --  AFB1  --  has similar expression pattern (mutual information value=0.918808) with  --  BGAL5
19 AFB3  --  interacts with  --  AFB1  --  has similar expression pattern (mutual information value=0.869815) with  --  AT3G12710
20 AFB3  --  interacts with  --  AFB1  --  has similar expression pattern (mutual information value=0.900916) with  --  YUUCA8
21 AFB3  --  interacts with  --  AFB1  --  has similar expression pattern (mutual information value=0.808083) with  --  ATBZIP61; BZIP61
22 AFB3  --  interacts with  --  AFB1  --  has similar expression pattern (mutual information value=0.812724) with  --  GASA4
23 AFB3  --  interacts with  --  AFB1  --  has similar expression pattern (mutual information value=0.88412) with  --  ATHB-3; ATHB3; HAT7; HB-3
24 AFB3  --  interacts with  --  AFB1  --  has similar expression pattern (mutual information value=1.29978) with  --  LNG1
25 AFB3  --  interacts with  --  AFB1  --  has similar expression pattern (mutual information value=0.958377) with  --  AT5G19340
26 AFB3  --  interacts with  --  AFB2  --  interacts with  --  ASK13; SK13
27 AFB3  --  interacts with  --  AFB2  --  interacts with  --  ASK12; SK12
28 AFB3  --  interacts with  --  AFB2  --  interacts with  --  IAA31
29 AFB3  --  interacts with  --  TIR1  --  interacts with  --  AFB5
30 AFB3  --  interacts with  --  TIR1  --  interacts with  --  AXR5
31 AFB3  --  interacts with  --  TIR1  --  interacts with  --  AUX1
32 AFB3  --  interacts with  --  TIR1  --  interacts with  --  AXR3
33 AFB3  --  interacts with  --  TIR1  --  interacts with  --  CIP1
34 AFB3  --  interacts with  --  TIR1  --  interacts with  --  ASK3; SK3
35 AFB3  --  interacts with  --  TIR1  --  interacts with  --  ASK9; SK9
36 AFB3  --  interacts with  --  TIR1  --  interacts with  --  IAA14
37 AFB3  --  interacts with  --  TIR1  --  is the target gene of  --  ath-miR852
38 AFB3  --  interacts with  --  BDL  --  regulates the expression of   --  ARF18
39 AFB3  --  interacts with  --  BDL  --  regulates the expression of   --  ARF1; ATARF; ATARF1; ATARFA1A
40 AFB3  --  interacts with  --  BDL  --  interacts with  --  ARF9
41 AFB3  --  interacts with  --  BDL  --  interacts with  --  IAA16
42 AFB3  --  interacts with  --  BDL  --  interacts with  --  IAA20
43 AFB3  --  interacts with  --  BDL  --  interacts with  --  IAA30
44 AFB3  --  interacts with  --  BDL  --  interacts with  --  IAA9
45 AFB3  --  interacts with  --  BDL  --  interacts with  --  IAA18
46 AFB3  --  interacts with  --  BDL  --  interacts with  --  ARF5
47 AFB3  --  interacts with  --  BDL  --  interacts with  --  ARF7
48 AFB3  --  interacts with  --  BDL  --  interacts with  --  ARF6
49 AFB3  --  interacts with  --  BDL  --  interacts with  --  ARF4
50 AFB3  --  interacts with  --  BDL  --  interacts with  --  ARF11
51 AFB3  --  interacts with  --  BDL  --  interacts with  --  IAA15
52 AFB3  --  interacts with  --  BDL  --  interacts with  --  IAA19
53 AFB3  --  interacts with  --  BDL  --  interacts with  --  IAA13
54 AFB3  --  interacts with  --  BDL  --  interacts with  --  ATAUX2-11; IAA4
55 AFB3  --  interacts with  --  BDL  --  interacts with  --  ARF8
56 AFB3  --  interacts with  --  BDL  --  is a member of  --  family38, transcription factor interactor and regulator gene
57 AFB3  --  interacts with  --  BDL  --  is a member of  --  IAA3 family34, transcription factor interactor and regulator gene
58 AFB3  --  interacts with  --  AXR2  --  interacts with  --  IAA27; PAP2
59 AFB3  --  interacts with  --  AXR2  --  interacts with  --  IAA32; MEE10
60 AFB3  --  interacts with  --  AXR2  --  interacts with  --  IAA33
61 AFB3  --  interacts with  --  AXR2  --  interacts with  --  IAA11
62 AFB3  --  interacts with  --  AXR2  --  interacts with  --  ATCUL1
63 AFB3  --  interacts with  --  AXR2  --  interacts with  --  TIR
64 AFB3  --  interacts with  --  AXR2  --  interacts with  --  IAA34
65 AFB3  --  interacts with  --  AXR2  --  interacts with  --  ARF22
66 AFB3  --  interacts with  --  AXR2  --  interacts with  --  IAA10
67 AFB3  --  interacts with  --  AXR2  --  interacts with  --  IAA2
68 AFB3  --  interacts with  --  AXR2  --  interacts with  --  TPR3
69 AFB3  --  interacts with  --  AXR2  --  has similar expression pattern (mutual information value=0.888679) with  --  PKS2
70 AFB3  --  interacts with  --  AXR2  --  is regulated by  --  HY5
71 AFB3  --  is the target gene of  --  ath-miR393b  --  inhibit the expression of  --  AT3G23690
72 AFB3  --  is the target gene of  --  ath-miR393b  --  inhibit the expression of  --  ATWRKY33; WRKY33
73 AFB3  --  is the target gene of  --  ath-miR393b  --  is a member of  --  family36, miRNA or ta-siRNA
74 AFB3  --  is a member of  --  TIR1 family31, coding gene  --  is a member of  --  np2055 complex12
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