Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node BIM1
Type: Protein GRN ID: np01055 Name: BIM1
Annotation: BIM1 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Gene Locus: AT5G08130
Transcription factor /
transcriptional regulator:		 transcription factor family bHLH
References:
  • Yin Y, Vafeados D, Tao Y, Yoshida S, Asami T, Chory J. A new class of transcription factors mediates brassinosteroid-regulated gene expression in Arabidopsis. Cell. 2005 Jan 28;120(2):249-59. PubMed PMID: 15680330.
 
Pathways: Brassinosteroids;  Gibberellins;  Jasmonates 
Gene Expression (Affy ATH1 probeset): 250569_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 BIM1  --  interacts with  --  BES1
3 BIM1  --  interacts with  --  DRN
4 BIM1  --  regulates the expression of   --  ATSAUR15; SAUR-AC1; SAUR15; SAUR_AC1
5 BIM1  --  regulates the expression of   --  AT1G29490
6 BIM1  --  is regulated by  --  JAZ10
7 BIM1  --  is regulated by  --  JAZ8
8 BIM1  --  is regulated by  --  JAZ1
9 BIM1  --  is a member of  --  BIM1 family16, transcription factor gene
10 BIM1  --  interacts with  --  BES1  --  regulates the expression of   --  ATGLK2; GLK2; GPRI2
11 BIM1  --  interacts with  --  BES1  --  regulates the expression of   --  ATGLK1; GLK1; GPRI1
12 BIM1  --  interacts with  --  BES1  --  regulates the expression of   --  BPG2
13 BIM1  --  interacts with  --  BES1  --  regulates the expression of   --  ATMYB30
14 BIM1  --  interacts with  --  BES1  --  regulates the expression of   --  ARF5
15 BIM1  --  interacts with  --  BES1  --  regulates the expression of   --  GL2
16 BIM1  --  interacts with  --  BES1  --  regulates the expression of   --  ATMYB66; MYB66; WER; WER1
17 BIM1  --  interacts with  --  BES1  --  regulates the expression of   --  CYC2; CYCB1;3
18 BIM1  --  interacts with  --  BES1  --  regulates the expression of   --  CYCB1;4
19 BIM1  --  interacts with  --  BES1  --  regulates the expression of   --  CYC3; CYCB1;5
20 BIM1  --  interacts with  --  BES1  --  regulates the expression of   --  CYC1; CYCB1; CYCB1;1
21 BIM1  --  interacts with  --  BES1  --  regulates the expression of   --  CYCD3; CYCD3;1
22 BIM1  --  interacts with  --  BES1  --  regulates the expression of   --  PIF7
23 BIM1  --  interacts with  --  BES1  --  regulates the expression of   --  PIF6; PIL2
24 BIM1  --  interacts with  --  BES1  --  regulates the expression of   --  PIF5; PIL6
25 BIM1  --  interacts with  --  BES1  --  regulates the expression of   --  PIF4
26 BIM1  --  interacts with  --  BES1  --  regulates the expression of   --  PIF3
27 BIM1  --  interacts with  --  BES1  --  regulates the expression of   --  PIFI
28 BIM1  --  interacts with  --  BES1  --  regulates the expression of   --  della family, transcription factor gene
29 BIM1  --  interacts with  --  BES1  --  regulates the expression of   --  ARF1 family35, transcription factor gene
30 BIM1  --  interacts with  --  BES1  --  regulates the expression of   --  AT3G48430
31 BIM1  --  interacts with  --  BES1  --  regulates the expression of   --  AT5G04240
32 BIM1  --  interacts with  --  BES1  --  regulates the expression of   --  HERK1/THE1 family13, coding gene
33 BIM1  --  interacts with  --  BES1  --  regulates the expression of   --  FAR2; MS2
34 BIM1  --  interacts with  --  BES1  --  interacts with  --  AtHsp90.2; ERD8; HSP81-2; HSP90.2
35 BIM1  --  interacts with  --  BES1  --  interacts with  --  HAT1
36 BIM1  --  interacts with  --  BES1  --  interacts with  --  AtIWS1
37 BIM1  --  interacts with  --  BES1  --  interacts with  --  ASHH2; CCR1; EFS; LAZ2; SDG8
38 BIM1  --  interacts with  --  BES1  --  interacts with  --  MAX2; ORE9; PPS
39 BIM1  --  interacts with  --  BES1  --  interacts with  --  ATB' BETA
40 BIM1  --  interacts with  --  BES1  --  interacts with  --  ATB' ALPHA
41 BIM1  --  interacts with  --  BES1  --  interacts with  --  ATMYBL2; MYBL2
42 BIM1  --  interacts with  --  BES1  --  interacts with  --  BIM3
43 BIM1  --  interacts with  --  BES1  --  interacts with  --  BIM2
44 BIM1  --  interacts with  --  BES1  --  is a member of  --  BZR1 family6, transcription factor gene
45 BIM1  --  interacts with  --  BES1  --  is a member of  --  BES1 family7, transcription factor gene
46 BIM1  --  interacts with  --  BES1  --  is a member of  --  bri1 complex7
47 BIM1  --  interacts with  --  BES1  --  is modified by  --  ASKTHETA; ATSK32; SK32
48 BIM1  --  interacts with  --  BES1  --  is modified by  --  ASKdZeta
49 BIM1  --  interacts with  --  BES1  --  is modified by  --  ATGSK1; ATSK2-3; ATSK22; BIL2; GSK1; SK22
50 BIM1  --  interacts with  --  DRN  --  is a member of  --  DRN family10, transcription factor gene
51 BIM1  --  interacts with  --  DRN  --  is a member of  --  DRN family11, transcription factor gene
52 BIM1  --  regulates the expression of   --  ATSAUR15; SAUR-AC1; SAUR15; SAUR_AC1  --  has similar expression pattern (mutual information value=0.906295) with  --  AT1G29430
53 BIM1  --  regulates the expression of   --  ATSAUR15; SAUR-AC1; SAUR15; SAUR_AC1  --  has similar expression pattern (mutual information value=0.906295) with  --  AT5G27780
54 BIM1  --  regulates the expression of   --  ATSAUR15; SAUR-AC1; SAUR15; SAUR_AC1  --  has similar expression pattern (mutual information value=0.872083) with  --  SAUR68
55 BIM1  --  is regulated by  --  JAZ10  --  regulates the expression of   --  AtMYB24; MYB24
56 BIM1  --  is regulated by  --  JAZ10  --  regulates the expression of   --  ATMYB21; ATMYB3; MYB21
57 BIM1  --  is regulated by  --  JAZ10  --  regulates the expression of   --  ATGL1; ATMYB0; GL1; MYB0
58 BIM1  --  is regulated by  --  JAZ10  --  regulates the expression of   --  BHLH42; TT8
59 BIM1  --  is regulated by  --  JAZ10  --  regulates the expression of   --  GL3; GL3; MYC6.2
60 BIM1  --  is regulated by  --  JAZ10  --  regulates the expression of   --  ATMYC-2; EGL1; EGL3
61 BIM1  --  is regulated by  --  JAZ10  --  interacts with  --  NINJA
62 BIM1  --  is regulated by  --  JAZ10  --  interacts with  --  AT4G00870
63 BIM1  --  is regulated by  --  JAZ10  --  interacts with  --  AT4G16430
64 BIM1  --  is regulated by  --  JAZ10  --  interacts with  --  AIB; ATAIB
65 BIM1  --  is regulated by  --  JAZ10  --  interacts with  --  AT1G01260
66 BIM1  --  is regulated by  --  JAZ10  --  interacts with  --  MYC4
67 BIM1  --  is regulated by  --  JAZ10  --  interacts with  --  MYC3
68 BIM1  --  is regulated by  --  JAZ10  --  interacts with  --  ATMYC2
69 BIM1  --  is regulated by  --  JAZ10  --  interacts with  --  COI1
70 BIM1  --  is regulated by  --  JAZ10  --  is a member of  --  JAI3 family107, transcription factor gene
71 BIM1  --  is regulated by  --  JAZ8  --  regulates the expression of   --  ATMYB75; MYB75; PAP1; SIAA1
72 BIM1  --  is regulated by  --  JAZ8  --  interacts with  --  ATWRKY57; WRKY57
73 BIM1  --  is regulated by  --  JAZ1  --  regulates the expression of   --  RGL3
74 BIM1  --  is regulated by  --  JAZ1  --  regulates the expression of   --  RGL2
75 BIM1  --  is regulated by  --  JAZ1  --  regulates the expression of   --  RGL
76 BIM1  --  is regulated by  --  JAZ1  --  regulates the expression of   --  EIL1
77 BIM1  --  is regulated by  --  JAZ1  --  interacts with  --  JAZ9
78 BIM1  --  is regulated by  --  JAZ1  --  interacts with  --  JAZ4
79 BIM1  --  is regulated by  --  JAZ1  --  interacts with  --  RGA1
80 BIM1  --  is regulated by  --  JAZ1  --  interacts with  --  ICE2; SCRM2
81 BIM1  --  is regulated by  --  JAZ1  --  interacts with  --  ATICE1; ICE1; SCRM
82 BIM1  --  is regulated by  --  JAZ1  --  interacts with  --  AT3G14080
83 BIM1  --  is regulated by  --  JAZ1  --  interacts with  --  LSU2
84 BIM1  --  is regulated by  --  JAZ1  --  interacts with  --  AT3G11830
85 BIM1  --  is regulated by  --  JAZ1  --  interacts with  --  AT5G14260
86 BIM1  --  is regulated by  --  JAZ1  --  interacts with  --  LSU1
87 BIM1  --  is regulated by  --  JAZ1  --  interacts with  --  EIN3
88 BIM1  --  is regulated by  --  JAZ1  --  is a member of  --  jaz complexes
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact