Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node BSU1
Type: Protein GRN ID: np01022 Name: BSU1
Annotation: BSU1 | Serine/threonine protein phosphatase family protein [EC:3.1.3.16]
Gene Locus: AT1G03445
References:
  • Mora-García S, Vert G, Yin Y, Caño-Delgado A, Cheong H, Chory J. Nuclear protein phosphatases with Kelch-repeat domains modulate the response to brassinosteroids in Arabidopsis. Genes Dev. 2004 Feb 15;18(4):448-60. Epub 2004 Feb 20. PubMed PMID: 14977918; PubMed Central PMCID: PMC359398.
 
Pathways: Brassinosteroids 
Gene Expression (Affy ATH1 probeset): 264823_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 BSU1  --  is modified by  --  AT5G02800
3 BSU1  --  is modified by  --  CDG1
4 BSU1  --  has similar expression pattern (mutual information value=0.80827) with  --  AT2G16680
5 BSU1  --  is a member of  --  bsk3 family17, coding gene
6 BSU1  --  is modified by  --  AT5G02800  --  has similar expression pattern (mutual information value=0.829497) with  --  AT3G52240
7 BSU1  --  is modified by  --  AT5G02800  --  has similar expression pattern (mutual information value=0.822886) with  --  NPC1
8 BSU1  --  is modified by  --  AT5G02800  --  modify  --  BSL1
9 BSU1  --  is modified by  --  AT5G02800  --  is modified by  --  BRI1/BIN1
10 BSU1  --  is modified by  --  CDG1  --  transport  --  Dopamine
11 BSU1  --  is modified by  --  CDG1  --  is a member of  --  bsk1 family15, coding gene
12 BSU1  --  has similar expression pattern (mutual information value=0.80827) with  --  AT2G16680  --  has similar expression pattern (mutual information value=0.817797) with  --  AT1G61510
13 BSU1  --  has similar expression pattern (mutual information value=0.80827) with  --  AT2G16680  --  has similar expression pattern (mutual information value=0.817797) with  --  AT4G22450
14 BSU1  --  has similar expression pattern (mutual information value=0.80827) with  --  AT2G16680  --  has similar expression pattern (mutual information value=0.82877) with  --  AT4G39753
15 BSU1  --  is a member of  --  bsk3 family17, coding gene  --  has family member  --  bsk3 family5, coding gene
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact