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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node ROT3
Type: Protein GRN ID: np01005 Name: ROT3
Annotation: ROT3 | Cytochrome P450 superfamily protein [EC:1.14.13.112]
Gene Locus: AT4G36380
References:
  • Kim GT, Tsukaya H, Uchimiya H. The ROTUNDIFOLIA3 gene of Arabidopsis thaliana encodes a new member of the cytochrome P-450 family that is required for the regulated polar elongation of leaf cells. Genes Dev. 1998 Aug 1;12(15):2381-91. PubMed PMID: 9694802; PubMed Central PMCID: PMC317051.
 
Pathways: Brassinosteroids 
Gene Expression (Affy ATH1 probeset): 246216_at    
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 Protein modification
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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 ROT3  --  has product (in catalytic reaction)  --  3-Dehydro-6-deoxoteasterone
3 ROT3  --  has product (in catalytic reaction)  --  6-deoxoTY
4 ROT3  --  is regulated by  --  ANT; CKC; CKC1; DRG
5 ROT3  --  has similar expression pattern (mutual information value=0.913056) with  --  AT5G65530
6 ROT3  --  is a member of  --  ROT3 family1, coding gene
7 ROT3  --  has product (in catalytic reaction)  --  3-Dehydro-6-deoxoteasterone  --  is product (in catalytic reaction) of  --  22-hydroxy-3-one
8 ROT3  --  has product (in catalytic reaction)  --  3-Dehydro-6-deoxoteasterone  --  is product (in catalytic reaction) of  --  3-epi-6-deoxoCT
9 ROT3  --  has product (in catalytic reaction)  --  3-Dehydro-6-deoxoteasterone  --  is product (in catalytic reaction) of  --  CYP90D1
10 ROT3  --  has product (in catalytic reaction)  --  6-deoxoTY  --  has product (in catalytic reaction)  --  TY
11 ROT3  --  has product (in catalytic reaction)  --  6-deoxoTY  --  has product (in catalytic reaction)  --  6-deoxoCS
12 ROT3  --  has similar expression pattern (mutual information value=0.913056) with  --  AT5G65530  --  has similar expression pattern (mutual information value=0.837989) with  --  AT5G66985
13 ROT3  --  is a member of  --  ROT3 family1, coding gene  --  has product (in catalytic reaction)  --  22,23-dihydroxy-4-en-3-one
14 ROT3  --  is a member of  --  ROT3 family1, coding gene  --  has product (in catalytic reaction)  --  22,23-dihydroxyCR
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