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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node lycopene
Type: Compound GRN ID: nc03016 Name: lycopene
Annotation: all-trans-Lycopene
KEGG Acc.: C05432
CHEBI ID:
Formula: C40H56
M.W.: 536.8726
Pathways: Abscisic acid 
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 lycopene  --  has product (in catalytic reaction)  --  beta-carotene
3 lycopene  --  is product (in catalytic reaction) of  --  phytoene
4 lycopene  --  is product (in catalytic reaction) of  --  CCR2; CRTISO
5 lycopene  --  is product (in catalytic reaction) of  --  7,9,7',9'-tetracis-Lycopene
6 lycopene  --  has product (in catalytic reaction)  --  beta-carotene  --  has product (in catalytic reaction)  --  beta-Cryptoxanthin
7 lycopene  --  has product (in catalytic reaction)  --  beta-carotene  --  has product (in catalytic reaction)  --  Zeaxanthin
8 lycopene  --  is product (in catalytic reaction) of  --  phytoene  --  is product (in catalytic reaction) of  --  DMAPD
9 lycopene  --  is product (in catalytic reaction) of  --  CCR2; CRTISO  --  has similar expression pattern (mutual information value=0.924512) with  --  ATCDPMEK; CDPMEK; ISPE; PDE277
10 lycopene  --  is product (in catalytic reaction) of  --  CCR2; CRTISO  --  has similar expression pattern (mutual information value=0.865343) with  --  IMPL1
11 lycopene  --  is product (in catalytic reaction) of  --  CCR2; CRTISO  --  has similar expression pattern (mutual information value=0.898907) with  --  AT5G11450
12 lycopene  --  is product (in catalytic reaction) of  --  7,9,7',9'-tetracis-Lycopene  --  is product (in catalytic reaction) of  --  PDE181; SPC1; ZDS
13 lycopene  --  is product (in catalytic reaction) of  --  7,9,7',9'-tetracis-Lycopene  --  is product (in catalytic reaction) of  --  7,9,9'-tricis-Neurosporene
14 lycopene  --  is product (in catalytic reaction) of  --  7,9,7',9'-tetracis-Lycopene  --  is product (in catalytic reaction) of  --  p-Benzoquinone
15 lycopene  --  is product (in catalytic reaction) of  --  7,9,7',9'-tetracis-Lycopene  --  is product (in catalytic reaction) of  --  9,9'-dicis-zeta-Carotene
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