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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node pal2 family111, coding gene
Type: Family GRN ID: gf08002 Name: pal2 family111, coding gene
Annotation: coding gene family, members include pal2, pal1, pal3, pal4
Pathways: Salicylic acid 
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Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 pal2 family111, coding gene  --  has family member  --  pal4
3 pal2 family111, coding gene  --  has family member  --  pal3
4 pal2 family111, coding gene  --  has family member  --  pal1
5 pal2 family111, coding gene  --  has family member  --  pal2
6 pal2 family111, coding gene  --  has family member  --  pal4  --  interacts with  --  SP1L4
7 pal2 family111, coding gene  --  has family member  --  pal4  --  interacts with  --  AT2G44130
8 pal2 family111, coding gene  --  has family member  --  pal4  --  interacts with  --  AT1G15670
9 pal2 family111, coding gene  --  has family member  --  pal4  --  has product (in catalytic reaction)  --  Tans-Cinnamic acid
10 pal2 family111, coding gene  --  has family member  --  pal3  --  has similar expression pattern (mutual information value=1.16557) with  --  ATCSLB03; ATCSLB3; CSLB03
11 pal2 family111, coding gene  --  has family member  --  pal3  --  has similar expression pattern (mutual information value=1.16557) with  --  ATCSLB04; ATCSLB4; CSLB04; CSLB04
12 pal2 family111, coding gene  --  has family member  --  pal3  --  has similar expression pattern (mutual information value=0.910025) with  --  CRR6
13 pal2 family111, coding gene  --  has family member  --  pal3  --  has similar expression pattern (mutual information value=0.947504) with  --  ALB-1V; ALB1; CHLD; PDE166; V157
14 pal2 family111, coding gene  --  has family member  --  pal3  --  has similar expression pattern (mutual information value=0.909871) with  --  AT3G05350
15 pal2 family111, coding gene  --  has family member  --  pal3  --  has similar expression pattern (mutual information value=0.839309) with  --  AT3G16670
16 pal2 family111, coding gene  --  has family member  --  pal3  --  has similar expression pattern (mutual information value=0.843604) with  --  AT3G28040
17 pal2 family111, coding gene  --  has family member  --  pal3  --  has similar expression pattern (mutual information value=0.810655) with  --  AT1G66940
18 pal2 family111, coding gene  --  has family member  --  pal3  --  has similar expression pattern (mutual information value=0.906033) with  --  AT4G28080
19 pal2 family111, coding gene  --  has family member  --  pal3  --  has similar expression pattern (mutual information value=0.937004) with  --  CAO; CPSRP43
20 pal2 family111, coding gene  --  has family member  --  pal3  --  has similar expression pattern (mutual information value=0.930035) with  --  NDHC
21 pal2 family111, coding gene  --  has family member  --  pal1  --  interacts with  --  AT3G59940
22 pal2 family111, coding gene  --  has family member  --  pal1  --  interacts with  --  AT3G15180
23 pal2 family111, coding gene  --  has family member  --  pal1  --  interacts with  --  AT1G80440
24 pal2 family111, coding gene  --  has family member  --  pal1  --  is regulated by  --  PRHA
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