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Location:  Home > Details for node lox family, coding gene
Type: Family GRN ID: gf07011 Name: lox family, coding gene
Annotation: coding gene family, members include ATLOX2, ATLOX6; LOX6, AT1G72520, LOX3
References:
  • Schommer C, Palatnik JF, Aggarwal P, Chételat A, Cubas P, Farmer EE, Nath U, Weigel D. Control of jasmonate biosynthesis and senescence by miR319 targets. PLoS Biol. 2008 Sep 23;6(9):e230. doi: 10.1371/journal.pbio.0060230. PubMed PMID: 18816164; PubMed Central PMCID: PMC2553836.
 
Pathways: Jasmonates;  Auxins 
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 lox family, coding gene  --  is regulated by  --  MEE35; TCP4
3 lox family, coding gene  --  has family member  --  LOX3
4 lox family, coding gene  --  has family member  --  AT1G72520
5 lox family, coding gene  --  has family member  --  ATLOX6; LOX6
6 lox family, coding gene  --  has family member  --  ATLOX2
7 lox family, coding gene  --  is regulated by  --  MEE35; TCP4  --  has similar expression pattern (mutual information value=0.80149) with  --  AT2G37220
8 lox family, coding gene  --  is regulated by  --  MEE35; TCP4  --  has similar expression pattern (mutual information value=0.813774) with  --  AT1G11430
9 lox family, coding gene  --  is regulated by  --  MEE35; TCP4  --  has similar expression pattern (mutual information value=0.949196) with  --  TCP3
10 lox family, coding gene  --  is regulated by  --  MEE35; TCP4  --  is the target gene of  --  ath-miR319c
11 lox family, coding gene  --  is regulated by  --  MEE35; TCP4  --  interacts with  --  TCP8
12 lox family, coding gene  --  is regulated by  --  MEE35; TCP4  --  interacts with  --  TCP5
13 lox family, coding gene  --  is regulated by  --  MEE35; TCP4  --  interacts with  --  AS2
14 lox family, coding gene  --  is regulated by  --  MEE35; TCP4  --  interacts with  --  NZZ; SPL
15 lox family, coding gene  --  is regulated by  --  MEE35; TCP4  --  interacts with  --  AHL27; ESC; ORE7
16 lox family, coding gene  --  is regulated by  --  MEE35; TCP4  --  interacts with  --  AT1G35560
17 lox family, coding gene  --  is regulated by  --  MEE35; TCP4  --  interacts with  --  AtTCP15; TCP15
18 lox family, coding gene  --  is regulated by  --  MEE35; TCP4  --  interacts with  --  AtTCP11; TCP11
19 lox family, coding gene  --  is regulated by  --  MEE35; TCP4  --  interacts with  --  AT5G51910
20 lox family, coding gene  --  is regulated by  --  MEE35; TCP4  --  interacts with  --  AT-TCP20; ATTCP20; PCF1; TCP20
21 lox family, coding gene  --  is regulated by  --  MEE35; TCP4  --  interacts with  --  AT2G37000
22 lox family, coding gene  --  is regulated by  --  MEE35; TCP4  --  interacts with  --  PTF1; TCP13; TFPD
23 lox family, coding gene  --  is regulated by  --  MEE35; TCP4  --  interacts with  --  TCP17
24 lox family, coding gene  --  is regulated by  --  MEE35; TCP4  --  interacts with  --  ATTCP24; TCP24
25 lox family, coding gene  --  is regulated by  --  MEE35; TCP4  --  interacts with  --  TCP2; TCP2
26 lox family, coding gene  --  is regulated by  --  MEE35; TCP4  --  interacts with  --  TCP10
27 lox family, coding gene  --  is regulated by  --  MEE35; TCP4  --  interacts with  --  TPR3
28 lox family, coding gene  --  is regulated by  --  MEE35; TCP4  --  interacts with  --  TPR2
29 lox family, coding gene  --  is regulated by  --  MEE35; TCP4  --  is a member of  --  TCPS family2, transcription factor gene
30 lox family, coding gene  --  is regulated by  --  MEE35; TCP4  --  is a member of  --  TCP family1, transcription factor gene
31 lox family, coding gene  --  has family member  --  LOX3  --  interacts with  --  AT1G67800
32 lox family, coding gene  --  has family member  --  LOX3  --  is a member of  --  LOX3 family101, coding gene
33 lox family, coding gene  --  has family member  --  LOX3  --  has similar expression pattern (mutual information value=0.818704) with  --  OPCL1
34 lox family, coding gene  --  has family member  --  ATLOX2  --  interacts with  --  AT.EIF4E1; CUM1; EIF4E; eIF4E1
35 lox family, coding gene  --  has family member  --  ATLOX2  --  interacts with  --  NDL1
36 lox family, coding gene  --  has family member  --  ATLOX2  --  has similar expression pattern (mutual information value=0.910559) with  --  PSAP; PSI-P; PTAC8; TMP14
37 lox family, coding gene  --  has family member  --  ATLOX2  --  has similar expression pattern (mutual information value=0.916118) with  --  LPA3
38 lox family, coding gene  --  has family member  --  ATLOX2  --  has similar expression pattern (mutual information value=0.828667) with  --  FMO GS-OX1
39 lox family, coding gene  --  has family member  --  ATLOX2  --  has similar expression pattern (mutual information value=0.964339) with  --  ATHM4; ATM4; TRX-M4
40 lox family, coding gene  --  has family member  --  ATLOX2  --  has similar expression pattern (mutual information value=0.82787) with  --  AOC2
41 lox family, coding gene  --  has family member  --  ATLOX2  --  has similar expression pattern (mutual information value=0.82787) with  --  AOC1
42 lox family, coding gene  --  has family member  --  ATLOX2  --  has similar expression pattern (mutual information value=0.895602) with  --  AT4G01150
43 lox family, coding gene  --  has family member  --  ATLOX2  --  has similar expression pattern (mutual information value=1.24425) with  --  CORI3; JR2
44 lox family, coding gene  --  has family member  --  ATLOX2  --  has similar expression pattern (mutual information value=1.22003) with  --  AT5G02940
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