Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node ATIPT1 family54, coding gene
Type: Family GRN ID: gf04001 Name: ATIPT1 family54, coding gene
Annotation: coding gene family, members include ATIPT1, ATIPT3, ATIPT4, ATIPT8, ATIPT5, ATIPT6, ATIPT7
Pathways: Cytokinins;  Auxins 
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 ATIPT1 family54, coding gene  --  has product (in catalytic reaction)  --  iPRMP
3 ATIPT1 family54, coding gene  --  has product (in catalytic reaction)  --  iPRDP
4 ATIPT1 family54, coding gene  --  has product (in catalytic reaction)  --  Iprtp
5 ATIPT1 family54, coding gene  --  is regulated by  --  IAA3
6 ATIPT1 family54, coding gene  --  has family member  --  ATIPT7
7 ATIPT1 family54, coding gene  --  has family member  --  ATIPT6
8 ATIPT1 family54, coding gene  --  has family member  --  ATIPT5
9 ATIPT1 family54, coding gene  --  has family member  --  ATIPT8
10 ATIPT1 family54, coding gene  --  has family member  --  ATIPT4
11 ATIPT1 family54, coding gene  --  has family member  --  ATIPT3
12 ATIPT1 family54, coding gene  --  has family member  --  ATIPT1
13 ATIPT1 family54, coding gene  --  has product (in catalytic reaction)  --  iPRMP  --  has product (in catalytic reaction)  --  iP
14 ATIPT1 family54, coding gene  --  has product (in catalytic reaction)  --  iPRMP  --  has product (in catalytic reaction)  --  iPR
15 ATIPT1 family54, coding gene  --  has product (in catalytic reaction)  --  iPRMP  --  has product (in catalytic reaction)  --  tZRMP
16 ATIPT1 family54, coding gene  --  has product (in catalytic reaction)  --  iPRMP  --  is product (in catalytic reaction) of  --  ETH family62, coding gene
17 ATIPT1 family54, coding gene  --  has product (in catalytic reaction)  --  iPRMP  --  is product (in catalytic reaction) of  --  adenosine family58, coding gene
18 ATIPT1 family54, coding gene  --  has product (in catalytic reaction)  --  iPRMP  --  is product (in catalytic reaction) of  --  DMAPP
19 ATIPT1 family54, coding gene  --  has product (in catalytic reaction)  --  iPRDP  --  has product (in catalytic reaction)  --  tZRDP
20 ATIPT1 family54, coding gene  --  has product (in catalytic reaction)  --  Iprtp  --  has product (in catalytic reaction)  --  tZRTP
21 ATIPT1 family54, coding gene  --  is regulated by  --  IAA3  --  regulates the expression of   --  ATPIN1 family27, coding gene
22 ATIPT1 family54, coding gene  --  is regulated by  --  IAA3  --  regulates the expression of   --  ASL18; LBD16
23 ATIPT1 family54, coding gene  --  is regulated by  --  IAA3  --  is regulated by  --  ARR12
24 ATIPT1 family54, coding gene  --  is regulated by  --  IAA3  --  is regulated by  --  ARR1
25 ATIPT1 family54, coding gene  --  is regulated by  --  IAA3  --  interacts with  --  ARF9
26 ATIPT1 family54, coding gene  --  is regulated by  --  IAA3  --  interacts with  --  AXR3
27 ATIPT1 family54, coding gene  --  is regulated by  --  IAA3  --  interacts with  --  IAA19
28 ATIPT1 family54, coding gene  --  is regulated by  --  IAA3  --  interacts with  --  IAA20
29 ATIPT1 family54, coding gene  --  is regulated by  --  IAA3  --  interacts with  --  IAA27; PAP2
30 ATIPT1 family54, coding gene  --  is regulated by  --  IAA3  --  interacts with  --  IAA34
31 ATIPT1 family54, coding gene  --  is regulated by  --  IAA3  --  interacts with  --  ATAUX2-11; IAA4
32 ATIPT1 family54, coding gene  --  is regulated by  --  IAA3  --  interacts with  --  ATAUX2-27; AUX2-27; IAA5
33 ATIPT1 family54, coding gene  --  is regulated by  --  IAA3  --  interacts with  --  IAA8
34 ATIPT1 family54, coding gene  --  is regulated by  --  IAA3  --  interacts with  --  IAA2
35 ATIPT1 family54, coding gene  --  is regulated by  --  IAA3  --  interacts with  --  AFB2
36 ATIPT1 family54, coding gene  --  is regulated by  --  IAA3  --  interacts with  --  TPR3
37 ATIPT1 family54, coding gene  --  is regulated by  --  IAA3  --  interacts with  --  ATGRX2; CXIP2
38 ATIPT1 family54, coding gene  --  is regulated by  --  IAA3  --  interacts with  --  AXR5
39 ATIPT1 family54, coding gene  --  is regulated by  --  IAA3  --  interacts with  --  AXR2
40 ATIPT1 family54, coding gene  --  is regulated by  --  IAA3  --  interacts with  --  IAA18
41 ATIPT1 family54, coding gene  --  is regulated by  --  IAA3  --  interacts with  --  IAA11
42 ATIPT1 family54, coding gene  --  is regulated by  --  IAA3  --  interacts with  --  ATGRX4; GRX4
43 ATIPT1 family54, coding gene  --  is regulated by  --  IAA3  --  interacts with  --  AT1G09500
44 ATIPT1 family54, coding gene  --  is regulated by  --  IAA3  --  interacts with  --  Phytochrome B (PhyB)
45 ATIPT1 family54, coding gene  --  is regulated by  --  IAA3  --  interacts with  --  TIR1
46 ATIPT1 family54, coding gene  --  is regulated by  --  IAA3  --  interacts with  --  ARF4
47 ATIPT1 family54, coding gene  --  is regulated by  --  IAA3  --  interacts with  --  ARF11
48 ATIPT1 family54, coding gene  --  is regulated by  --  IAA3  --  interacts with  --  ARF8
49 ATIPT1 family54, coding gene  --  is regulated by  --  IAA3  --  interacts with  --  ARF7
50 ATIPT1 family54, coding gene  --  is regulated by  --  IAA3  --  interacts with  --  ARF6
51 ATIPT1 family54, coding gene  --  is regulated by  --  IAA3  --  interacts with  --  ARF5
52 ATIPT1 family54, coding gene  --  is regulated by  --  IAA3  --  interacts with  --  IAA15
53 ATIPT1 family54, coding gene  --  is regulated by  --  IAA3  --  interacts with  --  IAA16
54 ATIPT1 family54, coding gene  --  is regulated by  --  IAA3  --  interacts with  --  IAA28
55 ATIPT1 family54, coding gene  --  is regulated by  --  IAA3  --  interacts with  --  IAA30
56 ATIPT1 family54, coding gene  --  is regulated by  --  IAA3  --  interacts with  --  IAA31
57 ATIPT1 family54, coding gene  --  is regulated by  --  IAA3  --  interacts with  --  IAA9
58 ATIPT1 family54, coding gene  --  is regulated by  --  IAA3  --  interacts with  --  BDL
59 ATIPT1 family54, coding gene  --  is regulated by  --  IAA3  --  interacts with  --  IAA13
60 ATIPT1 family54, coding gene  --  is regulated by  --  IAA3  --  interacts with  --  IAA14
61 ATIPT1 family54, coding gene  --  is regulated by  --  IAA3  --  interacts with  --  AFB1
62 ATIPT1 family54, coding gene  --  is regulated by  --  IAA3  --  interacts with  --  TPR2
63 ATIPT1 family54, coding gene  --  is regulated by  --  IAA3  --  is a member of  --  family38, transcription factor interactor and regulator gene
64 ATIPT1 family54, coding gene  --  is regulated by  --  IAA3  --  is a member of  --  IAA3 family34, transcription factor interactor and regulator gene
65 ATIPT1 family54, coding gene  --  is regulated by  --  IAA3  --  has similar expression pattern (mutual information value=0.810977) with  --  AT4G09890
66 ATIPT1 family54, coding gene  --  has family member  --  ATIPT7  --  is regulated by  --  BUM; BUM1; SHL; STM; WAM; WAM1
67 ATIPT1 family54, coding gene  --  has family member  --  ATIPT1  --  is the target gene of  --  ath-miR407
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation


Copyright © The Zhao Lab