To support the continuous development of PlantTFcat, please cite: Xinbin Dai, Senjuti Sinharoy, Michael K. Udvardi and Patrick X. Zhao, PlantTFcat: An Online Plant Transcription Factor and Transcriptional Regulator Categorization and Analysis Tool, BMC Bioinformatics, 2013, 14:321, doi:10.1186/1471-2105-14-321.
The Zhao Bioinformatics Laboratory
PlantTFcat: An Online Plant Transcription Factor and Transcriptional Regulator Categorization and Analysis Tool   
  About Analysis Family Help
Location:  Details of RAV family

  RAV
Family Type Transcription factor
Plant Specific Yes
Functional Domains DNA binding domain
Must-have InterProScan Domain Pattern IPR001471 and IPR003340
Prohibited InterProScan Domain Pattern IPR011124
Description

RAV TF family is a subfamily of B3-TF family. In RAV proteins both B3 DNA domain and an AP2-DNA domains are present. RAV binds to bipartite sequence motifs that contain consensus sequence elements for both the AP2 domain and B3 domains.

Reference:

K. Swaminathan, K. Peterson, T. Jack, The plant B3 superfamily. Trends Plant Sci 13, 647 (2008)
Cross-reference to other databases

The family is the same family of RAV in PlantTFDB.

The family is the subfamily family of ABI3VP2 in PlnTFDB.


 

Copyright © The Zhao Lab

Disclaimer | Contact