To support the continuous development of PlantTFcat, please cite: Xinbin Dai, Senjuti Sinharoy, Michael K. Udvardi and Patrick X. Zhao, PlantTFcat: An Online Plant Transcription Factor and Transcriptional Regulator Categorization and Analysis Tool, BMC Bioinformatics, 2013, 14:321, doi:10.1186/1471-2105-14-321.
The Zhao Bioinformatics Laboratory
PlantTFcat: An Online Plant Transcription Factor and Transcriptional Regulator Categorization and Analysis Tool   
  About Analysis Family Help
Location:  Details of CW-Zn-B3/VAL family

  CW-Zn-B3/VAL
Family Type Transcription factor & chromatin remodeling
Plant Specific No
Functional Domains DNA binding domain
Must-have InterProScan Domain Pattern IPR011124 and IPR003340
Prohibited InterProScan Domain Pattern IPR001471 IPR001965
Description

VAL genes are a subgroup of B3 DNA binding TF. In addition to the B3 domain, the VAL genes a CW-like zinc finger, an EAR type repressor motif a PHD (plant homeodomain)-like domain. In Arabidopsis double and triple mutant of VAL gene generates embryonic callus, suggest a strong role in plant development.

Reference:

K. Swaminathan, K. Peterson, T. Jack, The plant B3 superfamily. Trends Plant Sci 13, 647 (2008)

Cross-reference to other databases

The family is the sub family family of B3 in PlantTFDB.

The family is the subfamily family of ABI3VP1 in PlnTFDB.



 

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