LegumeIP V3: From Models to Crops - An Integrative Gene Discovery Platform for Translational Genomics in Legumes

  • [H. vulgare (gene)]
  • Detail of Experiment mapped on Hordeum vulgare vulgare L Hvulgare462r1

Details

NameRNA-Seq of the wild barley under salt stress
DescriptionRNA-Seq of the wild barley (H. spontaneum) under salt stress
ContactTHE UNIVERSITY OF TEXAS AT AUSTIN
XrefPRJNA227211
Reference
Conditions4
SpeciesHordeum vulgare
Metadata export .CSV   .JSON

Analysis

Mapped Genomes Hvulgare462r1    
Expression Analysis Expression Profile /  Differential Expression /  Co-expression

Conditions

Name Genotype Mutation Stage Tissue Treatment Level Time Samples Xref Download alignments
Control spontaneum Leaf Leaf from Hordeum vulgare subsp. spontaneum seedlings salt stressed 0 hrs
  • Control_1
  • Control_2
 .bam    .bai    .csi   
.bam    .bai    .csi   
SaltStress12hr spontaneum Leaf Leaf from Hordeum vulgare subsp. spontaneum seedlings salt stressed 12 hrs
  • SaltStress12hr_1
  • SaltStress12hr_2
  • SaltStress12hr_3
 .bam    .bai    .csi   
.bam    .bai    .csi   
.bam    .bai    .csi   
SaltStress24hr spontaneum Leaf Leaf from Hordeum vulgare subsp. spontaneum seedlings salt stressed 24 hrs
  • SaltStress24hr_1
  • SaltStress24hr_2
  • SaltStress24hr_3
 .bam    .bai    .csi   
.bam    .bai    .csi   
.bam    .bai    .csi   
SaltStress2hr spontaneum Leaf Leaf from Hordeum vulgare subsp. spontaneum seedlings salt stressed 2 hrs
  • SaltStress2hr_1
  • SaltStress2hr_2
 .bam    .bai    .csi   
.bam    .bai    .csi