LegumeIP V3: From Models to Crops - An Integrative Gene Discovery Platform for Translational Genomics in Legumes

  • [H. vulgare (gene)]
  • Detail of Experiment mapped on Hordeum vulgare vulgare L Hvulgare462r1

Details

NameDrought tolerance RNA-Seq experiment
DescriptionRNA-Seq analysis identifies genes associated with differential reproductive success under drought-stress in accessions of wild barley Hordeum spontaneum
ContactUHOH
XrefPRJEB8700
Reference
Conditions8
SpeciesHordeum vulgare
Metadata export .CSV   .JSON

Analysis

Mapped Genomes Hvulgare462r1    
Expression Analysis Expression Profile /  Differential Expression /  Co-expression

Conditions

Name Genotype Mutation Stage Tissue Treatment Level Time Samples Xref Download alignments
B1K0412_Control B1K0412 control
  • B1K0412_Control_1
  • B1K0412_Control_2
  • ERR776116 
  • ERR776117 
 .bam    .bai    .csi   
.bam    .bai    .csi   
B1K0412_Drought B1K0412 drought
  • B1K0412_Drought_1
  • B1K0412_Drought_2
  • ERR776118 
  • ERR776119 
 .bam    .bai    .csi   
.bam    .bai    .csi   
B1K3516_Control B1K3516 control
  • B1K3516_Control_1
  • B1K3516_Control_2
  • ERR776120 
  • ERR776121 
 .bam    .bai    .csi   
.bam    .bai    .csi   
B1K3516_Drought B1K3516 drought
  • B1K3516_Drought_1
  • B1K3516_Drought_2
  • ERR776122 
  • ERR776123 
 .bam    .bai    .csi   
.bam    .bai    .csi   
B1K3615_Control B1K3615 control
  • B1K3615_Control_1
  • B1K3615_Control_2
  • ERR776124 
  • ERR776125 
 .bam    .bai    .csi   
.bam    .bai    .csi   
B1K3615_Drought B1K3615 drought
  • B1K3615_Drought_1
  • B1K3615_Drought_2
  • ERR776126 
  • ERR776127 
 .bam    .bai    .csi   
.bam    .bai    .csi   
B1K4620_Control B1K4620 control
  • B1K4620_Control_1
  • B1K4620_Control_2
  • ERR776128 
  • ERR776129 
 .bam    .bai    .csi   
.bam    .bai    .csi   
B1K4620_Drought B1K4620 drought
  • B1K4620_Drought_1
  • B1K4620_Drought_2
  • ERR776130 
  • ERR776131 
 .bam    .bai    .csi   
.bam    .bai    .csi