LegumeIP V3: From Models to Crops - An Integrative Gene Discovery Platform for Translational Genomics in Legumes

Details

Name	RNA-seq transcriptome profiling of barley under Pi starvation and recovery conditions
Description	RNA-seq transcriptome profiling of barley under Pi starvation and recovery conditions
Contact	GANSU AGRICULTURAL UNIVERSITY
Xref	PRJNA430281
Reference	Ren P et al . 2018;
Conditions	24
Species	Hordeum vulgare
Metadata export	.CSV .JSON

Analysis

Mapped Genomes	Hvulgare462r1
Expression Analysis	Expression Profile / Differential Expression / Co-expression

Conditions

Name	Genotype	Tissue	Treatment	Time	Samples	Xref	Download alignments
G-P03G	GN121	root	low phosphorus	day 3	G-P03G_1 G-P03G_2 G-P03G_3	SRR6655949 SRR6655948 SRR6655951	.bam .bai .csi .bam .bai .csi .bam .bai .csi
G-P03Y	GN121	leaf	low phosphorus	day 3	G-P03Y_1 G-P03Y_2 G-P03Y_3	SRR6655938 SRR6655953 SRR6655952	.bam .bai .csi .bam .bai .csi .bam .bai .csi
G-P19G	GN121	root	low phosphorus	day 19	G-P19G_1 G-P19G_2 G-P19G_3	SRR6655965 SRR6655964 SRR6655990	.bam .bai .csi .bam .bai .csi .bam .bai .csi
G-P19Y	GN121	leaf	low phosphorus	day 19	G-P19Y_1 G-P19Y_2 G-P19Y_3	SRR6655991 SRR6655992 SRR6655993	.bam .bai .csi .bam .bai .csi .bam .bai .csi
G-P22G	GN121	root	low phosphorus	day 22	G-P22G_1 G-P22G_2 G-P22G_3	SRR6655986 SRR6655987 SRR6655988	.bam .bai .csi .bam .bai .csi .bam .bai .csi
G-P22Y	GN121	leaf	low phosphorus	day 22	G-P22Y_1 G-P22Y_2 G-P22Y_3	SRR6655940 SRR6655984 SRR6655983	.bam .bai .csi .bam .bai .csi .bam .bai .csi
GCK03G	GN121	root	normal phosphorus	day 3	GCK03G_1 GCK03G_2 GCK03G_3	SRR6655989 SRR6655982 SRR6655942	.bam .bai .csi .bam .bai .csi .bam .bai .csi
GCK03Y	GN121	leaf	normal phosphorus	day 3	GCK03Y_1 GCK03Y_2 GCK03Y_3	SRR6655985 SRR6655968 SRR6655970	.bam .bai .csi .bam .bai .csi .bam .bai .csi
GCK19G	GN121	root	normal phosphorus	day 19	GCK19G_1 GCK19G_2 GCK19G_3	SRR6655946 SRR6655950 SRR6655981	.bam .bai .csi .bam .bai .csi .bam .bai .csi
GCK19Y	GN121	leaf	normal phosphorus	day 19	GCK19Y_1 GCK19Y_2 GCK19Y_3	SRR6655939 SRR6655947 SRR6655941	.bam .bai .csi .bam .bai .csi .bam .bai .csi
GR22G	GN121	root	recovery with normal phosphorus	day 22	GR22G_1 GR22G_2 GR22G_3	SRR6655955 SRR6655954 SRR6655944	.bam .bai .csi .bam .bai .csi .bam .bai .csi
GR22Y	GN121	leaf	recovery with normal phosphorus	day 22	GR22Y_1 GR22Y_2 GR22Y_3	SRR6655943 SRR6655980 SRR6655979	.bam .bai .csi .bam .bai .csi .bam .bai .csi
M-P03G	GN42	root	low phosphorus	day 3	M-P03G_1 M-P03G_2 M-P03G_3	SRR6655957 SRR6655956 SRR6655959	.bam .bai .csi .bam .bai .csi .bam .bai .csi
M-P03Y	GN42	leaf	low phosphorus	day 3	M-P03Y_1 M-P03Y_2 M-P03Y_3	SRR6655958 SRR6655967 SRR6655966	.bam .bai .csi .bam .bai .csi .bam .bai .csi
M-P19G	GN42	root	low phosphorus	day 19	M-P19G_1 M-P19G_2 M-P19G_3	SRR6656004 SRR6656005 SRR6656006	.bam .bai .csi .bam .bai .csi .bam .bai .csi
M-P19Y	GN42	leaf	low phosphorus	day 19	M-P19Y_1 M-P19Y_2 M-P19Y_3	SRR6656007 SRR6656008 SRR6656009	.bam .bai .csi .bam .bai .csi .bam .bai .csi
M-P22G	GN42	root	low phosphorus	day 22	M-P22G_1 M-P22G_2 M-P22G_3	SRR6655994 SRR6655995 SRR6655961	.bam .bai .csi .bam .bai .csi .bam .bai .csi
M-P22Y	GN42	leaf	low phosphorus	day 22	M-P22Y_1 M-P22Y_2 M-P22Y_3	SRR6655960 SRR6655963 SRR6655962	.bam .bai .csi .bam .bai .csi .bam .bai .csi
MCK03G	GN42	root	normal phosphorus	day 3	MCK03G_1 MCK03G_2 MCK03G_3	SRR6655973 SRR6655974 SRR6655969	.bam .bai .csi .bam .bai .csi .bam .bai .csi
MCK03Y	GN42	leaf	normal phosphorus	day 3	MCK03Y_1 MCK03Y_2 MCK03Y_3	SRR6655945 SRR6656002 SRR6656003	.bam .bai .csi .bam .bai .csi .bam .bai .csi
MCK19G	GN42	root	normal phosphorus	day 19	MCK19G_1 MCK19G_2 MCK19G_3	SRR6655975 SRR6655976 SRR6655977	.bam .bai .csi .bam .bai .csi .bam .bai .csi
MCK19Y	GN42	leaf	normal phosphorus	day 19	MCK19Y_1 MCK19Y_2 MCK19Y_3	SRR6655978 SRR6655971 SRR6655972	.bam .bai .csi .bam .bai .csi .bam .bai .csi
MR22G	GN42	root	recovery with normal phosphorus	day 22	MR22G_1 MR22G_2 MR22G_3	SRR6656000 SRR6656001 SRR6655998	.bam .bai .csi .bam .bai .csi .bam .bai .csi
MR22Y	GN42	leaf	recovery with normal phosphorus	day 22	MR22Y_1 MR22Y_2 MR22Y_3	SRR6655999 SRR6655996 SRR6655997	.bam .bai .csi .bam .bai .csi .bam .bai .csi