LegumeIP V3: From Models to Crops - An Integrative Gene Discovery Platform for Translational Genomics in Legumes

  • [P. vulgaris (transcript)]
  • Detail of Experiment mapped on Phaseolus vulgaris Pv442V2.1

Details

NameTranscriptome analysis of salt tolerant common bean (Phaseolus vulgaris L.) under saline conditions
DescriptionTranscription profiling of a salt tolerant common bean variety to get insight of the salt responsive genes and regulatory pathways.
ContactBogazici University
XrefPRJNA216981
Reference
Conditions6
SpeciesPhaseolus vulgaris
Metadata export .CSV   .JSON

Analysis

Mapped Genomes Pv442V2.1    
Expression Analysis Expression Profile /  Differential Expression /  Co-expression

Conditions

Name Genotype Mutation Stage Tissue Treatment Level Time Samples Xref Download alignments
1LC Ispir Leaf under saline conditions
  • 1LC_1
 .bam    .bai    .csi   
1LS Ispir under saline conditions
  • 1LS_1
 .bam    .bai    .csi   
2RC Ispir Root under saline conditions
  • 2RC_1
 .bam    .bai    .csi   
2RS Ispir Root under saline conditions
  • 2RS_1
 .bam    .bai    .csi   
3RC Ispir Root under saline conditions
  • 3RC_1
 .bam    .bai    .csi   
3RS Ispir Root under saline conditions
  • 3RS_1
 .bam    .bai    .csi