LegumeIP V3: From Models to Crops - An Integrative Gene Discovery Platform for Translational Genomics in Legumes

  • [P. vulgaris (gene)]
  • Detail of Experiment mapped on Phaseolus vulgaris Pv442V2.1

Details

NameHost Transcriptional Profiling at Early and Later Stages of the Compatible Interaction Between Phaseolus vulgaris and Meloidogyne incognita
DescriptionTwelve transcriptional libraries of Phaseolus vulgaris roots infected by M. incognita. Assessments were performed at two time points, 4 and 10 days after inoculation (DAI). The transcriptional data were obtained by high-throughput Illumina sequencing platform.
ContactUSP/ESALQ
XrefPRJNA288189
Reference
Conditions4
SpeciesPhaseolus vulgaris
Metadata export .CSV   .JSON

Analysis

Mapped Genomes Pv442V2.1    
Expression Analysis Expression Profile /  Differential Expression /  Co-expression

Conditions

Name Genotype Mutation Stage Tissue Treatment Level Time Samples Xref Download alignments
10DAI_control IPR Saracura 10 days after inoculation roots P_vulgaris_10DAI_controlP_vulgaris_10DAI_control_sample_1
  • 10DAI_control_1
  • 10DAI_control_2
  • 10DAI_control_3
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10DAI_inoculated IPR Saracura 10 days after inoculation roots P_vulgaris_10DAI_inoculated_sample_2
  • 10DAI_inoculated_1
  • 10DAI_inoculated_2
  • 10DAI_inoculated_3
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4DAI_control IPR Saracura 4 days after inoculation roots P_vulgaris_4DAI_control_sample_2
  • 4DAI_control_1
  • 4DAI_control_2
  • 4DAI_control_3
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4DAI_inoculated IPR Saracura 4 days after inoculation roots P_vulgaris_4DAI_inoculated_sample_1
  • 4DAI_inoculated_1
  • 4DAI_inoculated_2
  • 4DAI_inoculated_3
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