LegumeIP V3: From Models to Crops - An Integrative Gene Discovery Platform for Translational Genomics in Legumes

  • [M. truncatula (gene)]
  • Detail of Experiment mapped on Medicago truncatula A17 MtrunA17r5.0
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Details

NameSymbiotic Interactions 1
DescriptionPublicly available RNA-seq dataset from LIPM-INRA-CNRS was collected from P-starved root tissue treated with sulfated or non-sulfated Myc-LCOs for three hours.
ContactLIPM-INRA-CNRS (weblipm@toulouse.inra.fr)
XrefPRJNA252090
Reference
Conditions3
SpeciesMedicago truncatula
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Analysis

Mapped Genomes MtrunA17r5.0     MtV4.0    
Expression Analysis Expression Profile /  Differential Expression /  Co-expression

Conditions

Name Genotype Mutation Stage Tissue Treatment Level Time Samples Xref Download alignments
Myc_Ctrl A17 Seedlings grown on plates root Mock treated 4 Hours
  • Myc_Ctrl_1
  • Myc_Ctrl_2
  • Myc_Ctrl_3
 .bam    .bai    .csi   
.bam    .bai    .csi   
.bam    .bai    .csi   
Myc_LCO_NSulf A17 Seedlings grown on plates root Treated with non-sulfated Myc-LCO 4 Hours
  • Myc_LCO_NSulf_1
  • Myc_LCO_NSulf_2
  • Myc_LCO_NSulf_3
 .bam    .bai    .csi   
.bam    .bai    .csi   
.bam    .bai    .csi   
Myc_LCO_Sulf A17 Seedlings grown on plates root Treated with sulfated Myc-LCO 4 Hours
  • Myc_LCO_Sulf_1
  • Myc_LCO_Sulf_2
  • Myc_LCO_Sulf_3
 .bam    .bai    .csi   
.bam    .bai    .csi   
.bam    .bai    .csi