| Name | Hormone treatment |
|---|---|
| Description | RNA-seq libraries were obtained from roots of Medicago truncatula A17 plants three days post germination. The seedlings were immersed in water (pH 6.8) containing the hormones at different concentrations; 1 uM IAA (Auxin), 100 nM BAP (Cytokinin) and an equal volume of the solvent control (DMSO). The seedlings were placed in the dark for 3 hours after which the root tips were removed and 40-60 roots per replicate were used. |
| Contact | Sonali Roy (sroy@noble.org) or Ivone Torres-Jerez (itjerez@noble.org) |
| Xref | PRJNA490370 |
| Reference | |
| Conditions | 3 |
| Species | Medicago truncatula |
| Metadata export | .CSV .JSON |
| Mapped Genomes | MtrunA17r5.0 MtV4.0 |
|---|---|
| Expression Analysis | Expression Profile / Differential Expression / Co-expression |
| Name | Genotype | Mutation | Stage | Tissue | Treatment | Level | Time | Samples | Xref | Download alignments |
|---|---|---|---|---|---|---|---|---|---|---|
| BAP3hr | A17 | 3 days after germination | root |
Cytokinin - 6-Benzylaminopurine; Medicago seedlings Roots |
100 nM 6-Benzylaminopurine | 3 hr |
|
.bam
.bai
.csi
.bam .bai .csi .bam .bai .csi |
||
| Control3hr | A17 | 3 days after germination | root |
DMSO Control; Medicago seedlings Roots |
DMSO Control | 3 hr |
|
.bam
.bai
.csi
.bam .bai .csi .bam .bai .csi |
||
| IAA3hr | A17 | 3 days after germination | root |
Auxin - Indole-3-acetic acid; Medicago seedlings Roots |
1 uM Indole-3-acetic acid | 3 hr |
|
.bam
.bai
.csi
.bam .bai .csi .bam .bai .csi |