LegumeIP V3: From Models to Crops - An Integrative Gene Discovery Platform for Translational Genomics in Legumes

  • [G. max (gene)]
  • Detail of Experiment mapped on Glycine max Wm82 Gm275Wm82a2V1

Details

NameDistinct transcriptional profiles of ozone stress in soybean (Glycine max) flowers and pods
DescriptionThe sustainability of soybean growth is being significantly affected by increases in ozone concentration. Current increases in ozone concentrations have decreased soybean yields by ~15-25%. Furthermore, soybean plants differentiate many more floral buds than survive to mature pods. Studies have found that pod set can be as low as 20-40% under normal conditions. Generally, it is assumed that abortion rates can vary based on location in the canopy, source-sink relationship, hormone levels, shade, water status. However, the genetic controls of flower and pod abscission in soybean are largely unknown, and the effects of ozone on flower and pod abscission have not been thoroughly investigated. Due to the negative effects of ozone on yield, it is of critical importance to understand the genetic control behind soybean abortion. The objective of this study is to understand the gene expression patterns underpinning flower and pod abscission rates in soybean exposed to elevated ozone concentrations.
ContactUniversity of Illinois Urbana Champaign
XrefPRJNA236472
Reference
Conditions4
SpeciesGlycine max
Metadata export .CSV   .JSON

Analysis

Mapped Genomes Gm275Wm82a2V1     Gm508Wm82a4V1    
Expression Analysis Expression Profile /  Differential Expression /  Co-expression

Conditions

Name Genotype Mutation Stage Tissue Treatment Level Time Samples Xref Download alignments
Control_R2 93B15 R2 Flower Control
  • Control_R2_1
  • Control_R2_2
  • Control_R2_3
  • Control_R2_4
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Control_R4 93B15 R4 Pod Control
  • Control_R4_1
  • Control_R4_2
  • Control_R4_3
  • Control_R4_4
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Ozone_R2 93B15 R2 Flower Ozone
  • Ozone_R2_1
  • Ozone_R2_2
  • Ozone_R2_3
  • Ozone_R2_4
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Ozone_R4 93B15 R4 Pod Ozone
  • Ozone_R4_1
  • Ozone_R4_2
  • Ozone_R4_3
  • Ozone_R4_4
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