LegumeIP V3: From Models to Crops - An Integrative Gene Discovery Platform for Translational Genomics in Legumes

  • [C. cajan (gene)]
  • Detail of Experiment mapped on Cajanus cajan CcV1

Details

NameTranscript data of pigeon pea shoot tissue
DescriptionTranscriptome of salt- tolerant and salt- susceptible pigeon pea genotypes under control and salt treated shoot tissue
ContactIARI
XrefPRJNA343064
Reference
Conditions4
SpeciesCajanus cajan
Metadata export .CSV   .JSON

Analysis

Mapped Genomes CcV1    
Expression Analysis Expression Profile /  Differential Expression /  Co-expression

Conditions

Name Genotype Mutation Stage Tissue Treatment Level Time Samples Xref Download alignments
SCS ICP 1071 (Salt susceptible pigeon pea genotype) four weeks-old seedling shoot Susceptible control shoot (SCS)
  • SCS_1
 .bam    .bai    .csi   
STS ICP 1071 (Salt susceptible pigeon pea genotype) four weeks-old seedling shoot Susceptible treated shoot (STS)
  • STS_1
 .bam    .bai    .csi   
TCS ICP 7 (Salt tolerant pigeon pea genotype) four weeks-old seedling shoot Tolerant control shoot (TCS)
  • TCS_1
 .bam    .bai    .csi   
TTS ICP 7 (Salt tolerant pigeon pea genotype) four weeks-old seedling shoot Tolerant treated shoot (TTS)
  • TTS_1
 .bam    .bai    .csi