| Name | Transcriptional changes during arbuscular mycorrhiza |
|---|---|
| Description | In order to isolate AM induced genes in Lotus japonicus, we performed transcriptome analysis in AM infected root by RNA-seq. The host root infected with arbuscular mycorrhizal fungi (Rhizophagus irregularis) showed drastic change of the transcriptional profiles and give important information to know the gene regulation mechanisms. |
| Contact | National Institute for Basic Biology |
| Xref | PRJDB3234 |
| Reference |
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| Conditions | 2 |
| Species | Lotus japonicus |
| Metadata export | .CSV .JSON |
| Mapped Genomes | LjMG20V3 |
|---|---|
| Expression Analysis | Expression Profile / Differential Expression / Co-expression |
| Name | Genotype | Mutation | Stage | Tissue | Treatment | Level | Time | Samples | Xref | Download alignments |
|---|---|---|---|---|---|---|---|---|---|---|
| Gifu_control | Gifu B-129 | root | Total RNA was isolated from the uninfected roots |
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.bam
.bai
.csi
.bam .bai .csi .bam .bai .csi |
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| Gifu_Mycinf | Gifu B-129 | root | Total RNA was isolated from the roots infected with AM fungi |
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.bam
.bai
.csi
.bam .bai .csi .bam .bai .csi |