LegumeIP V3: From Models to Crops - An Integrative Gene Discovery Platform for Translational Genomics in Legumes

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Name Experiment Genotype Mutation Stage Tissue/organ Treatment Level Time replicates
M-R- effects of rhizobia and m ...... JA17 7 weeks roots no mycorrhizal fungi or rhizobia 8
M-R+ effects of rhizobia and m ...... JA17 7 weeks roots no mycorrhizal fungi but rhizobia present 8
M+R- effects of rhizobia and m ...... JA17 7 weeks roots mycorrhizal fungi present but no rhizobia 7
M+R+ effects of rhizobia and m ...... JA17 7 weeks roots mycorrhizal fungi and rhizobia present 8
A17_LCO_WT- CK dependent Rhizobium LC ...... A17 wild type genotype Susceptible zone E-MTAB-3007:A17 LCO WT002- 3h 3
A17_LCO_WT+ CK dependent Rhizobium LC ...... A17 wild type genotype Susceptible zone E-MTAB-3007:A17 LCO WT002+ 3h 3
A17_noLCO_WT- CK dependent Rhizobium LC ...... A17 wild type genotype Susceptible zone E-MTAB-3007:A17 noLCO WT003- 3h 3
A17_noLCO_WT+ CK dependent Rhizobium LC ...... A17 wild type genotype Susceptible zone E-MTAB-3007:A17 noLCO WT001+ 3h 3
Mtcre1_LCO_WT- CK dependent Rhizobium LC ...... A17 Mtcre1 mutant Susceptible zone E-MTAB-3007:Mtcre1 LCO WT003- 3h 3
Mtcre1_LCO_WT+ CK dependent Rhizobium LC ...... A17 Mtcre1 mutant Susceptible zone E-MTAB-3007:Mtcre1 LCO WT003+ 3h 3
Mtcre1_noLCO_WT- CK dependent Rhizobium LC ...... A17 Mtcre1 mutant Susceptible zone E-MTAB-3007:Mtcre1 noLCO WT001- 3h 3
Mtcre1_noLCO_WT+ CK dependent Rhizobium LC ...... A17 Mtcre1 mutant Susceptible zone E-MTAB-3007:Mtcre1 noLCO WT002+ 3h 3
Control transcriptome profiling o ...... R108 4th trifolate leaf of 3 week old plant leaf Infiltrated with 35S:MtCOla 4 days post infiltration 3
LAP1 transcriptome profiling o ...... R108 4th trifolate leaf of 3 week old plant leaf Infiltrated with 35S:MtLAP1 4 days post infiltration 3
A17-0.5h Nodule Development 3 A17 5 day old seedlings root root innoculated with Sinorhizobium medicae 0.5h 4
A17-0h Nodule Development 3 A17 5 day old seedlings root root innoculated with Sinorhizobium medicae 0h 4
A17-12h Nodule Development 3 A17 5 day old seedlings root root innoculated with Sinorhizobium medicae 12h 4
A17-1h Nodule Development 3 A17 5 day old seedlings root root innoculated with Sinorhizobium medicae 1h 4
A17-24h Nodule Development 3 A17 5 day old seedlings root root innoculated with Sinorhizobium medicae 24h 4
A17-36h Nodule Development 3 A17 5 day old seedlings root root innoculated with Sinorhizobium medicae 36h 4
A17-3h Nodule Development 3 A17 5 day old seedlings root root innoculated with Sinorhizobium medicae 3h 4
A17-48h Nodule Development 3 A17 5 day old seedlings root root innoculated with Sinorhizobium medicae 48h 4
A17-6h Nodule Development 3 A17 5 day old seedlings root root innoculated with Sinorhizobium medicae 6h 4
LYK3-0.5h Nodule Development 3 LYK3 5 day old seedlings root root innoculated with Sinorhizobium medicae 0.5h 4
LYK3-0h Nodule Development 3 LYK3 5 day old seedlings root root innoculated with Sinorhizobium medicae 0h 4
LYK3-12h Nodule Development 3 LYK3 5 day old seedlings root root innoculated with Sinorhizobium medicae 12h 4
LYK3-1h Nodule Development 3 LYK3 5 day old seedlings root root innoculated with Sinorhizobium medicae 1h 4
LYK3-24h Nodule Development 3 LYK3 5 day old seedlings root root innoculated with Sinorhizobium medicae 24h 4
LYK3-36h Nodule Development 3 LYK3 5 day old seedlings root root innoculated with Sinorhizobium medicae 36h 4
LYK3-3h Nodule Development 3 LYK3 5 day old seedlings root root innoculated with Sinorhizobium medicae 3h 4