LegumeIP V3: From Models to Crops - An Integrative Gene Discovery Platform for Translational Genomics in Legumes

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Name Experiment Genotype Mutation Stage Tissue/organ Treatment Level Time replicates
A17_LCO_WT- CK dependent Rhizobium LC ...... A17 wild type genotype Susceptible zone E-MTAB-3007:A17 LCO WT002- 3h 3
A17_LCO_WT+ CK dependent Rhizobium LC ...... A17 wild type genotype Susceptible zone E-MTAB-3007:A17 LCO WT002+ 3h 3
A17_noLCO_WT- CK dependent Rhizobium LC ...... A17 wild type genotype Susceptible zone E-MTAB-3007:A17 noLCO WT003- 3h 3
A17_noLCO_WT+ CK dependent Rhizobium LC ...... A17 wild type genotype Susceptible zone E-MTAB-3007:A17 noLCO WT001+ 3h 3
Mtcre1_LCO_WT- CK dependent Rhizobium LC ...... A17 Mtcre1 mutant Susceptible zone E-MTAB-3007:Mtcre1 LCO WT003- 3h 3
Mtcre1_LCO_WT+ CK dependent Rhizobium LC ...... A17 Mtcre1 mutant Susceptible zone E-MTAB-3007:Mtcre1 LCO WT003+ 3h 3
Mtcre1_noLCO_WT- CK dependent Rhizobium LC ...... A17 Mtcre1 mutant Susceptible zone E-MTAB-3007:Mtcre1 noLCO WT001- 3h 3
Mtcre1_noLCO_WT+ CK dependent Rhizobium LC ...... A17 Mtcre1 mutant Susceptible zone E-MTAB-3007:Mtcre1 noLCO WT002+ 3h 3
cre1_12h_mock Symbiotic Interactions an ...... cre1 mutant ecotype jemalong cultivar Jester root mock 12h 3
cre1_12h_S.meliloti Symbiotic Interactions an ...... cre1 mutant ecotype jemalong cultivar Jester root Inoculated with Sinorhizobium meliloti strain 2011 12h 3
cre1_24h_mock Symbiotic Interactions an ...... cre1 mutant ecotype jemalong cultivar Jester root mock 24h 3
cre1_24h_S.meliloti Symbiotic Interactions an ...... cre1 mutant ecotype jemalong cultivar Jester root Inoculated with Sinorhizobium meliloti strain 2011 24h 3
latroot_12h_control Symbiotic Interactions an ...... wild type ecotype jemalong cultivar Jester root no treatment 12h of lateral root initiation 4
latroot_12h_turned Symbiotic Interactions an ...... wild type ecotype jemalong cultivar Jester root turned 135° for 12 hours 12h of lateral root initiation 4
latroot_24h_control Symbiotic Interactions an ...... wild type ecotype jemalong cultivar Jester root no treatment 24h of lateral root initiation 4
latroot_24h_turned Symbiotic Interactions an ...... wild type ecotype jemalong cultivar Jester root turned 135° for 12 hours 24h of lateral root initiation 4
latroot_36h_control Symbiotic Interactions an ...... wild type ecotype jemalong cultivar Jester root no treatment 36h of lateral root initiation 4
latroot_36h_turned Symbiotic Interactions an ...... wild type ecotype jemalong cultivar Jester root turned 135° for 12 hours 36h of lateral root initiation 4
latroot_48h_control Symbiotic Interactions an ...... wild type ecotype jemalong cultivar Jester root no treatment 48h of lateral root initiation 4
latroot_48h_turned Symbiotic Interactions an ...... wild type ecotype jemalong cultivar Jester root turned 135° for 12 hours 48h of lateral root initiation 4
latroot_60h_control Symbiotic Interactions an ...... wild type ecotype jemalong cultivar Jester root no treatment 60h of lateral root initiation 4
latroot_60h_turned Symbiotic Interactions an ...... wild type ecotype jemalong cultivar Jester root turned 135° for 12 hours 60h of lateral root initiation 4
latroot_72h_control Symbiotic Interactions an ...... wild type ecotype jemalong cultivar Jester root no treatment 72h of lateral root initiation 4
latroot_72h_turned Symbiotic Interactions an ...... wild type ecotype jemalong cultivar Jester root turned 135° for 12 hours 72h of lateral root initiation 4
lbd11-16_24h_mock Symbiotic Interactions an ...... lbd16/lbd11 doble mutant ecotype R108 root mock 24h 3
lbd11-16_24h_S.meliloti Symbiotic Interactions an ...... lbd16/lbd11 doble mutant ecotype R108 root Inoculated with Sinorhizobium meliloti strain 2011 24h 4
lbd16_24h_mock Symbiotic Interactions an ...... lbd16 mutant ecotype R108 root mock 24h 4
lbd16_24h_S.meliloti Symbiotic Interactions an ...... lbd16 mutant ecotype R108 root Inoculated with Sinorhizobium meliloti strain 2011 24h 4
nin_12h_mock Symbiotic Interactions an ...... nin mutant ecotype jemalong cultivar Jester root mock 12h 3
nin_12h_S.meliloti Symbiotic Interactions an ...... nin mutant ecotype jemalong cultivar Jester root Inoculated with Sinorhizobium meliloti strain 2011 12h 3