LegumeIP V3
: From Models to Crops - An Integrative Gene Discovery Platform for Translational Genomics in Legumes
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[
M. truncatula
(transcript)]
Differential Expression
Experiment
Numerator condition
Denominator condition
Option
Submission
Result
Clean and Start Over
Choose numerator condition (treatment)
29 Rows Page 1/1
Name
Genotype
Mutation
Stage
Tissue/organ
Treatment
Level
Time
Replicate
HM034_control
HM034
14 dpi
root
Uninoculated
3
HM034_smedicae
HM034
14 dpi
nodule
Inoculated by Sinorhizobium medicae (WSM419)
3
HM034_smeliloti
HM034
14 dpi
nodule
Inoculated by Sinorhizobium meliloti (KH46c)
3
HM056_control
HM056
14 dpi
root
Uninoculated
3
HM056_smedicae
HM056
14 dpi
nodule
Inoculated by Sinorhizobium medicae (WSM419)
3
HM056_smeliloti
HM056
14 dpi
nodule
Inoculated by Sinorhizobium meliloti (KH46c)
3
HM101_control
HM101
14 dpi
root
Uninoculated
3
HM101_smedicae
HM101
14 dpi
nodule
Inoculated by Sinorhizobium medicae (WSM419)
3
HM101_smeliloti
HM101
14 dpi
nodule
Inoculated by Sinorhizobium meliloti (KH46c)
3
HM340_control
HM340
14 dpi
root
Uninoculated
3
HM340_smedicae
HM340
14 dpi
nodule
Inoculated by Sinorhizobium medicae (WSM419)
3
HM340_smeliloti
HM340
14 dpi
nodule
Inoculated by Sinorhizobium meliloti (KH46c)
3
Control
R108
4th trifolate leaf of 3 week old plant
leaf
Infiltrated with 35S:MtCOla
4 days post infiltration
3
LAP1
R108
4th trifolate leaf of 3 week old plant
leaf
Infiltrated with 35S:MtLAP1
4 days post infiltration
3
Rbm_Mock_24H
A17
3 day old seedlings
root epidermis
mock-treated
no Nod factor
24h
3
Rbm_Mock_4H
A17
3 day old seedlings
root epidermis
mock-treated
no Nod factor
4h
3
Rbm_NF_24H
A17
3 day old seedlings
root epidermis
treated with symbiotic lipochitooligosaccharides (LCOs)
1E-08 M Nod factor
24h
2
Rbm_NF_4H
A17
3 day old seedlings
root epidermis
treated with symbiotic lipochitooligosaccharides (LCOs)
1E-08 M Nod factor
4h
3
Control
wild type A17
5 days
Root Hairs
control
0h
2
NodFactor_20h
wild type A17
5 days
Root Hairs
Nod Factor
20h
2
NodFactor_4h
wild type A17
5 days
Root Hairs
Nod Factor
4h
2
SUNN_Control_Root
A17
SUNN
18 days after planting
root
Whole root from un-colonized A17 sunn mutant
Sterile soil
At planting
3
SUNN_Control_Shoot
A17
SUNN
18 days after planting
shoot
Whole shoot from un-colonized A17 sunn mutant
Sterile soil
At planting
3
SUNN_Mycorrhiza_Root
A17
SUNN
18 days after planting
root
Whole root from mycorrhiza colonized A17 sunn mutant
10 % (w/w) soil inoculum
At planting
3
SUNN_Mycorrhiza_Shoot
A17
SUNN
18 days after planting
shoot
Whole shoot from mycorrhiza colonized A17 sunn mutant
10 % (w/w) soil inoculum
At planting
3
Wildtype_Control_Root
A17
None
18 days after planting
root
Whole root from un-colonized A17 wild type
Sterile soil
At planting
3
Wildtype_Control_Shoot
A17
None
18 days after planting
shoot
Whole shoot from un-colonized A17 wild type
Sterile soil
At planting
3
Wildtype_Mycorrhiza_Root
A17
None
18 days after planting
root
Whole root from mycorrhiza colonized A17 wild type
10 % (w/w) soil inoculum
At planting
3
Wildtype_Mycorrhiza_Shoot
A17
None
18 days after planting
shoot
Whole shoot from mycorrhiza colonized A17 wild type
10 % (w/w) soil inoculum
At planting
3