LegumeIP V3
: From Models to Crops - An Integrative Gene Discovery Platform for Translational Genomics in Legumes
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[
M. truncatula
(transcript)]
Differential Expression
Experiment
Numerator condition
Denominator condition
Option
Submission
Result
Clean and Start Over
Choose numerator condition (treatment)
36 Rows Page 1/2
Name
Genotype
Mutation
Stage
Tissue/organ
Treatment
Level
Time
Replicate
CONTROL
Jemalong J5
CONTROL
21 days
Hairy root
3
TSAR1_OE
Jemalong J5
TSAR1 over expression
21 days
Hairy root
3
TSAR2_OE
Jemalong J5
TSAR2 over expression
21 days
Hairy root
3
Control
wild type A17
5 days
Root Hairs
control
0h
2
NodFactor_20h
wild type A17
5 days
Root Hairs
Nod Factor
20h
2
NodFactor_4h
wild type A17
5 days
Root Hairs
Nod Factor
4h
2
177_dmi3_+NF
Jemalong J5
dmi3 (TRV25)
seedling
root
Nod factor treatment
1hr
3
177_dmi3_ctrl
Jemalong J5
dmi3 (TRV25)
seedling
root
control
1hr
3
177_nfp_+NF
Jemalong A17
nfp (C31)
seedling
root
Nod factor treatment
1hr
3
177_nfp_ctrl
Jemalong A17
nfp (C31)
seedling
root
control
1hr
3
177_wt_+NF
Jemalong A17
wt
seedling
root
Nod factor treatment
1hr
3
177_wt_ctrl
Jemalong A17
wt
seedling
root
control
1hr
3
K-1000xK-Root
A17
21 days after germination
root
Low Potassium
2.45 µM K
21 days
3
K-1000xK-Shoot
A17
21 days after germination
shoot
Low Potassium
2.45 µM K
21 days
3
K-FN-Root
A17
21 days after germination
root
Full Nutrition
Full Potassium (2.45 mM K)
21 days
3
K-FN-Shoot
A17
21 days after germination
shoot
Full Nutrition
Full Potassium (2.45 mM K)
21 days
3
K-Re-supply-Root
A17
21 days after germination
root
Low Potassium;
K Re-supply
2.45 µM K;
2.45 mM K
21 days;
4x 1.5 Hours
3
K-Re-supply-Shoot
A17
21 days after germination
shoot
Low Potassium;
K Re-supply
2.45 µM K;
2.45 mM K
21 days;
4x 1.5 Hours
3
N-10xN-Root
A17
21 days after germination
root
Low Nitrogen
0.2 mM N
21 days
3
N-10xN-Shoot
A17
21 days after germination
shoot
Low Nitrogen
0.2 mM N
21 days
3
N-FN-Root
A17
21 days after germination
root
Full Nutrition
Full Nitrogen (2.0 mM N)
21 days
3
N-FN-Shoot
A17
21 days after germination
shoot
Full Nutrition
Full Nitrogen (2.0 mM N)
21 days
3
N-Re-supply-Root
A17
21 days after germination
root
Low Nitrogen;
N Re-supply
0.2 mM N;
2.0 mM N
21 days;
4x 1.5 Hours
3
N-Re-supply-Shoot
A17
21 days after germination
shoot
Low Nitrogen;
N Re-supply
0.2 mM N;
2.0 mM N
21 days;
4x 1.5 Hours
3
P-100xP-Root
A17
21 days after germination
root
Low Phosphorous
6.0 µM P
21 days
3
P-100xP-Shoot
A17
21 days after germination
shoot
Low Phosphorous
6.0 µM P
21 days
3
P-FN-Root
A17
21 days after germination
root
Full Nutrition
Full Phosphorous (0.6 mM P); Full Sulfur (0.6 mM S)
21 days
3
P-FN-Shoot
A17
21 days after germination
shoot
Full Nutrition
Full Phosphorous (0.6 mM P); Full Sulfur (0.6 mM S)
21 days
3
P-Re-supply-Root
A17
21 days after germination
root
Low Phosphorous;
P Re-supply
6.0 µM P;
0.6 mM P
21 days;
4x 1.5 Hours
3
P-Re-supply-Shoot
A17
21 days after germination
shoot
Low Phosphorous;
P Re-supply
6.0 µM P;
0.6 mM P
21 days;
4x 1.5 Hours
3