LegumeIP V3: From Models to Crops - An Integrative Gene Discovery Platform for Translational Genomics in Legumes

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Choose conditions for co-expression analysis

  
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Name Experiment Genotype Mutation Stage Tissue/organ Treatment Level Time replicates
Control transcriptome profiling o ...... R108 4th trifolate leaf of 3 week old plant leaf Infiltrated with 35S:MtCOla 4 days post infiltration 3
LAP1 transcriptome profiling o ...... R108 4th trifolate leaf of 3 week old plant leaf Infiltrated with 35S:MtLAP1 4 days post infiltration 3
Control Transcriptomic response t ...... wild type A17 5 days Root Hairs control 0h 2
NodFactor_20h Transcriptomic response t ...... wild type A17 5 days Root Hairs Nod Factor 20h 2
NodFactor_4h Transcriptomic response t ...... wild type A17 5 days Root Hairs Nod Factor 4h 2
BAP3hr Hormone treatment A17 3 days after germination root Cytokinin - 6-Benzylaminopurine;
Medicago seedlings Roots 		100 nM 6-Benzylaminopurine 3 hr 3
Control3hr Hormone treatment A17 3 days after germination root DMSO Control;
Medicago seedlings Roots 		DMSO Control 3 hr 3
IAA3hr Hormone treatment A17 3 days after germination root Auxin - Indole-3-acetic acid;
Medicago seedlings Roots 		1 uM Indole-3-acetic acid 3 hr 3
Pooja-FN_Shoot Macronutrient Deficiencie ...... A17 22 days after germination shoot Full Nutrition 0.6 mM P; 1.2 mM N beginning at 14 days 2
Pooja-FN-Root Macronutrient Deficiencie ...... A17 22 days after germination root Full Nutrition 0.6 mM P; 1.2 mM N beginning at 14 days 3
Pooja-NoN_Root Macronutrient Deficiencie ...... A17 22 days after germination root No Nitrogen 0 µM N beginning at 14 days 3
Pooja-NoN_Shoot Macronutrient Deficiencie ...... A17 22 days after germination shoot No Nitrogen 0 µM N beginning at 14 days 2
Pooja-NoP_Root Macronutrient Deficiencie ...... A17 22 days after germination root No Phosphorous 0 µM P beginning at 14 days 3
Pooja-NoP_Shoot Macronutrient Deficiencie ...... A17 22 days after germination shoot No Phosphorous 0 µM P beginning at 14 days 2
Salt_Root_No_HM198 Salt Stress HM198 25 days old root No Salt 3
Salt_Root_No_HM309 Salt Stress HM309 25 days old root No Salt 3
Salt_Root_Salt_HM198 Salt Stress HM198 25 days old root Salt - NaCl day 10 = 0.5% NaCl; day 15 = 1% NaCl; day 20 = 1.5% NaCl 3
Salt_Root_Salt_HM309 Salt Stress HM309 25 days old root Salt - NaCl day 10 = 0.5% NaCl; day 15 = 1% NaCl; day 20 = 1.5% NaCl 3
Salt_Shoot_No_HM198 Salt Stress HM198 25 days old shoot No Salt 3
Salt_Shoot_No_HM309 Salt Stress HM309 25 days old shoot No Salt 3
Salt_Shoot_Salt_HM198 Salt Stress HM198 25 days old shoot Salt - NaCl day 10 = 0.5% NaCl; day 15 = 1% NaCl; day 20 = 1.5% NaCl 3
Salt_Shoot_Salt_HM309 Salt Stress HM309 25 days old shoot Salt - NaCl day 10 = 0.5% NaCl; day 15 = 1% NaCl; day 20 = 1.5% NaCl 3