LegumeIP V3: From Models to Crops - An Integrative Gene Discovery Platform for Translational Genomics in Legumes

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Name Experiment Genotype Mutation Stage Tissue/organ Treatment Level Time replicates
Control Transcriptomic response t ...... wild type A17 5 days Root Hairs control 0h 2
NodFactor_20h Transcriptomic response t ...... wild type A17 5 days Root Hairs Nod Factor 20h 2
NodFactor_4h Transcriptomic response t ...... wild type A17 5 days Root Hairs Nod Factor 4h 2
177_dmi3_+NF transcriptome profile of ...... Jemalong J5 dmi3 (TRV25) seedling root Nod factor treatment 1hr 3
177_dmi3_ctrl transcriptome profile of ...... Jemalong J5 dmi3 (TRV25) seedling root control 1hr 3
177_nfp_+NF transcriptome profile of ...... Jemalong A17 nfp (C31) seedling root Nod factor treatment 1hr 3
177_nfp_ctrl transcriptome profile of ...... Jemalong A17 nfp (C31) seedling root control 1hr 3
177_wt_+NF transcriptome profile of ...... Jemalong A17 wt seedling root Nod factor treatment 1hr 3
177_wt_ctrl transcriptome profile of ...... Jemalong A17 wt seedling root control 1hr 3
Salt_Root_No_HM198 Salt Stress HM198 25 days old root No Salt 3
Salt_Root_No_HM309 Salt Stress HM309 25 days old root No Salt 3
Salt_Root_Salt_HM198 Salt Stress HM198 25 days old root Salt - NaCl day 10 = 0.5% NaCl; day 15 = 1% NaCl; day 20 = 1.5% NaCl 3
Salt_Root_Salt_HM309 Salt Stress HM309 25 days old root Salt - NaCl day 10 = 0.5% NaCl; day 15 = 1% NaCl; day 20 = 1.5% NaCl 3
Salt_Shoot_No_HM198 Salt Stress HM198 25 days old shoot No Salt 3
Salt_Shoot_No_HM309 Salt Stress HM309 25 days old shoot No Salt 3
Salt_Shoot_Salt_HM198 Salt Stress HM198 25 days old shoot Salt - NaCl day 10 = 0.5% NaCl; day 15 = 1% NaCl; day 20 = 1.5% NaCl 3
Salt_Shoot_Salt_HM309 Salt Stress HM309 25 days old shoot Salt - NaCl day 10 = 0.5% NaCl; day 15 = 1% NaCl; day 20 = 1.5% NaCl 3