LegumeIP V3: From Models to Crops - An Integrative Gene Discovery Platform for Translational Genomics in Legumes

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Name Experiment Genotype Mutation Stage Tissue/organ Treatment Level Time replicates
HM034_control inoculation of symbiotic ...... HM034 14 dpi root Uninoculated 3
HM034_smedicae inoculation of symbiotic ...... HM034 14 dpi nodule Inoculated by Sinorhizobium medicae (WSM419) 3
HM034_smeliloti inoculation of symbiotic ...... HM034 14 dpi nodule Inoculated by Sinorhizobium meliloti (KH46c) 3
HM056_control inoculation of symbiotic ...... HM056 14 dpi root Uninoculated 3
HM056_smedicae inoculation of symbiotic ...... HM056 14 dpi nodule Inoculated by Sinorhizobium medicae (WSM419) 3
HM056_smeliloti inoculation of symbiotic ...... HM056 14 dpi nodule Inoculated by Sinorhizobium meliloti (KH46c) 3
HM101_control inoculation of symbiotic ...... HM101 14 dpi root Uninoculated 3
HM101_smedicae inoculation of symbiotic ...... HM101 14 dpi nodule Inoculated by Sinorhizobium medicae (WSM419) 3
HM101_smeliloti inoculation of symbiotic ...... HM101 14 dpi nodule Inoculated by Sinorhizobium meliloti (KH46c) 3
HM340_control inoculation of symbiotic ...... HM340 14 dpi root Uninoculated 3
HM340_smedicae inoculation of symbiotic ...... HM340 14 dpi nodule Inoculated by Sinorhizobium medicae (WSM419) 3
HM340_smeliloti inoculation of symbiotic ...... HM340 14 dpi nodule Inoculated by Sinorhizobium meliloti (KH46c) 3
efd_10dpi importance of DNA (de)met ...... Jemalong A17 root nodule Inoculated with S. meliloti 10dpi 3
pDME:DMEi_28dpi importance of DNA (de)met ...... Jemalong A17 root nodule Inoculated with S. meliloti 28dpi 3
pDME:DMEi_9dpi importance of DNA (de)met ...... Jemalong A17 root nodule Inoculated with S. meliloti 9dpi 3
pDME:GUS_28dpi importance of DNA (de)met ...... Jemalong A17 root nodule Inoculated with S. meliloti 28dpi 3
pDME:GUS_9dpi importance of DNA (de)met ...... Jemalong A17 root nodule Inoculated with S. meliloti 9dpi 3
Control transcriptome profiling o ...... R108 4th trifolate leaf of 3 week old plant leaf Infiltrated with 35S:MtCOla 4 days post infiltration 3
LAP1 transcriptome profiling o ...... R108 4th trifolate leaf of 3 week old plant leaf Infiltrated with 35S:MtLAP1 4 days post infiltration 3
Rbm_Mock_24H Symbiotic Interactions 3 A17 3 day old seedlings root epidermis mock-treated no Nod factor 24h 3
Rbm_Mock_4H Symbiotic Interactions 3 A17 3 day old seedlings root epidermis mock-treated no Nod factor 4h 3
Rbm_NF_24H Symbiotic Interactions 3 A17 3 day old seedlings root epidermis treated with symbiotic lipochitooligosaccharides (LCOs) 1E-08 M Nod factor 24h 2
Rbm_NF_4H Symbiotic Interactions 3 A17 3 day old seedlings root epidermis treated with symbiotic lipochitooligosaccharides (LCOs) 1E-08 M Nod factor 4h 3
Cold_0h The U-box family genes in ...... Wild type Jemalong A17 4 weeks seedling Cold 0h 1
Cold_12h The U-box family genes in ...... Wild type Jemalong A17 4 weeks seedling Cold 12h 1
Cold_2h The U-box family genes in ...... Wild type Jemalong A17 4 weeks seedling Cold 2h 1
Cold_6h The U-box family genes in ...... Wild type Jemalong A17 4 weeks seedling Cold 6h 1
Drought_0h The U-box family genes in ...... Wild type Jemalong A17 4 weeks seedling Drought 0h 1
Drought_12h The U-box family genes in ...... Wild type Jemalong A17 4 weeks seedling Drought 12h 1
Drought_2h The U-box family genes in ...... Wild type Jemalong A17 4 weeks seedling Drought 2h 1