LegumeIP V3: From Models to Crops - An Integrative Gene Discovery Platform for Translational Genomics in Legumes

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Name Experiment Genotype Mutation Stage Tissue/organ Treatment Level Time replicates
A17_Mocktreated_2dpi important ethylene signal ...... A17 A17 (wild type) Seedling root Mock treated 2 days 3
A17_Mocktreated_7dpi important ethylene signal ...... A17 A17 (wild type) Seedling root Mock treated 7 days 3
A17_R.solani_inoculated_treated_2dpi important ethylene signal ...... A17 A17 (wild type) Seedling root R. solani inoculated treated 2 days 3
A17_R.solani_inoculated_treated_7dpi important ethylene signal ...... A17 A17 (wild type) Seedling root R. solani inoculated treated 7 days 3
sickle_Mocktreated_2dpi important ethylene signal ...... A17 sickle mutant (ethylene insensitive, point mutation in A17) Seedling root Mock treated 2 days 3
sickle_Mocktreated_7dpi important ethylene signal ...... A17 sickle mutant (ethylene insensitive, point mutation in A17) Seedling root Mock treated 7 days 3
sickle_R.solani_inoculated_treated_2dpi important ethylene signal ...... A17 sickle mutant (ethylene insensitive, point mutation in A17) Seedling root R. solani inoculated treated 2 days 3
sickle_R.solani_inoculated_treated_7dpi important ethylene signal ...... A17 sickle mutant (ethylene insensitive, point mutation in A17) Seedling root R. solani inoculated treated 7 days 3
CONTROL TSAR1 and TSAR2 activate ...... Jemalong J5 CONTROL 21 days Hairy root 3
TSAR1_OE TSAR1 and TSAR2 activate ...... Jemalong J5 TSAR1 over expression 21 days Hairy root 3
TSAR2_OE TSAR1 and TSAR2 activate ...... Jemalong J5 TSAR2 over expression 21 days Hairy root 3
177_dmi3_+NF transcriptome profile of ...... Jemalong J5 dmi3 (TRV25) seedling root Nod factor treatment 1hr 3
177_dmi3_ctrl transcriptome profile of ...... Jemalong J5 dmi3 (TRV25) seedling root control 1hr 3
177_nfp_+NF transcriptome profile of ...... Jemalong A17 nfp (C31) seedling root Nod factor treatment 1hr 3
177_nfp_ctrl transcriptome profile of ...... Jemalong A17 nfp (C31) seedling root control 1hr 3
177_wt_+NF transcriptome profile of ...... Jemalong A17 wt seedling root Nod factor treatment 1hr 3
177_wt_ctrl transcriptome profile of ...... Jemalong A17 wt seedling root control 1hr 3
Pooja-FN_Shoot Macronutrient Deficiencie ...... A17 22 days after germination shoot Full Nutrition 0.6 mM P; 1.2 mM N beginning at 14 days 2
Pooja-FN-Root Macronutrient Deficiencie ...... A17 22 days after germination root Full Nutrition 0.6 mM P; 1.2 mM N beginning at 14 days 3
Pooja-NoN_Root Macronutrient Deficiencie ...... A17 22 days after germination root No Nitrogen 0 µM N beginning at 14 days 3
Pooja-NoN_Shoot Macronutrient Deficiencie ...... A17 22 days after germination shoot No Nitrogen 0 µM N beginning at 14 days 2
Pooja-NoP_Root Macronutrient Deficiencie ...... A17 22 days after germination root No Phosphorous 0 µM P beginning at 14 days 3
Pooja-NoP_Shoot Macronutrient Deficiencie ...... A17 22 days after germination shoot No Phosphorous 0 µM P beginning at 14 days 2
Myc_Ctrl Symbiotic Interactions 1 A17 Seedlings grown on plates root Mock treated 4 Hours 3
Myc_LCO_NSulf Symbiotic Interactions 1 A17 Seedlings grown on plates root Treated with non-sulfated Myc-LCO 4 Hours 3
Myc_LCO_Sulf Symbiotic Interactions 1 A17 Seedlings grown on plates root Treated with sulfated Myc-LCO 4 Hours 3