LegumeIP V3: From Models to Crops - An Integrative Gene Discovery Platform for Translational Genomics in Legumes

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Name Experiment Genotype Mutation Stage Tissue/organ Treatment Level Time replicates
CONTROL TSAR1 and TSAR2 activate ...... Jemalong J5 CONTROL 21 days Hairy root 3
TSAR1_OE TSAR1 and TSAR2 activate ...... Jemalong J5 TSAR1 over expression 21 days Hairy root 3
TSAR2_OE TSAR1 and TSAR2 activate ...... Jemalong J5 TSAR2 over expression 21 days Hairy root 3
177_dmi3_+NF transcriptome profile of ...... Jemalong J5 dmi3 (TRV25) seedling root Nod factor treatment 1hr 3
177_dmi3_ctrl transcriptome profile of ...... Jemalong J5 dmi3 (TRV25) seedling root control 1hr 3
177_nfp_+NF transcriptome profile of ...... Jemalong A17 nfp (C31) seedling root Nod factor treatment 1hr 3
177_nfp_ctrl transcriptome profile of ...... Jemalong A17 nfp (C31) seedling root control 1hr 3
177_wt_+NF transcriptome profile of ...... Jemalong A17 wt seedling root Nod factor treatment 1hr 3
177_wt_ctrl transcriptome profile of ...... Jemalong A17 wt seedling root control 1hr 3
cre1_12h_mock Symbiotic Interactions an ...... cre1 mutant ecotype jemalong cultivar Jester root mock 12h 3
cre1_12h_S.meliloti Symbiotic Interactions an ...... cre1 mutant ecotype jemalong cultivar Jester root Inoculated with Sinorhizobium meliloti strain 2011 12h 3
cre1_24h_mock Symbiotic Interactions an ...... cre1 mutant ecotype jemalong cultivar Jester root mock 24h 3
cre1_24h_S.meliloti Symbiotic Interactions an ...... cre1 mutant ecotype jemalong cultivar Jester root Inoculated with Sinorhizobium meliloti strain 2011 24h 3
latroot_12h_control Symbiotic Interactions an ...... wild type ecotype jemalong cultivar Jester root no treatment 12h of lateral root initiation 4
latroot_12h_turned Symbiotic Interactions an ...... wild type ecotype jemalong cultivar Jester root turned 135° for 12 hours 12h of lateral root initiation 4
latroot_24h_control Symbiotic Interactions an ...... wild type ecotype jemalong cultivar Jester root no treatment 24h of lateral root initiation 4
latroot_24h_turned Symbiotic Interactions an ...... wild type ecotype jemalong cultivar Jester root turned 135° for 12 hours 24h of lateral root initiation 4
latroot_36h_control Symbiotic Interactions an ...... wild type ecotype jemalong cultivar Jester root no treatment 36h of lateral root initiation 4
latroot_36h_turned Symbiotic Interactions an ...... wild type ecotype jemalong cultivar Jester root turned 135° for 12 hours 36h of lateral root initiation 4
latroot_48h_control Symbiotic Interactions an ...... wild type ecotype jemalong cultivar Jester root no treatment 48h of lateral root initiation 4
latroot_48h_turned Symbiotic Interactions an ...... wild type ecotype jemalong cultivar Jester root turned 135° for 12 hours 48h of lateral root initiation 4
latroot_60h_control Symbiotic Interactions an ...... wild type ecotype jemalong cultivar Jester root no treatment 60h of lateral root initiation 4
latroot_60h_turned Symbiotic Interactions an ...... wild type ecotype jemalong cultivar Jester root turned 135° for 12 hours 60h of lateral root initiation 4
latroot_72h_control Symbiotic Interactions an ...... wild type ecotype jemalong cultivar Jester root no treatment 72h of lateral root initiation 4
latroot_72h_turned Symbiotic Interactions an ...... wild type ecotype jemalong cultivar Jester root turned 135° for 12 hours 72h of lateral root initiation 4
lbd11-16_24h_mock Symbiotic Interactions an ...... lbd16/lbd11 doble mutant ecotype R108 root mock 24h 3
lbd11-16_24h_S.meliloti Symbiotic Interactions an ...... lbd16/lbd11 doble mutant ecotype R108 root Inoculated with Sinorhizobium meliloti strain 2011 24h 4
lbd16_24h_mock Symbiotic Interactions an ...... lbd16 mutant ecotype R108 root mock 24h 4
lbd16_24h_S.meliloti Symbiotic Interactions an ...... lbd16 mutant ecotype R108 root Inoculated with Sinorhizobium meliloti strain 2011 24h 4
nin_12h_mock Symbiotic Interactions an ...... nin mutant ecotype jemalong cultivar Jester root mock 12h 3