LegumeIP V3: From Models to Crops - An Integrative Gene Discovery Platform for Translational Genomics in Legumes

Choose numerator condition (treatment)


  Name Genotype Mutation Stage Tissue/organ Treatment Level Time Replicate
A17_LCO_WT- A17 wild type genotype Susceptible zone E-MTAB-3007:A17 LCO WT002- 3h 3
A17_LCO_WT+ A17 wild type genotype Susceptible zone E-MTAB-3007:A17 LCO WT002+ 3h 3
A17_noLCO_WT- A17 wild type genotype Susceptible zone E-MTAB-3007:A17 noLCO WT003- 3h 3
A17_noLCO_WT+ A17 wild type genotype Susceptible zone E-MTAB-3007:A17 noLCO WT001+ 3h 3
Mtcre1_LCO_WT- A17 Mtcre1 mutant Susceptible zone E-MTAB-3007:Mtcre1 LCO WT003- 3h 3
Mtcre1_LCO_WT+ A17 Mtcre1 mutant Susceptible zone E-MTAB-3007:Mtcre1 LCO WT003+ 3h 3
Mtcre1_noLCO_WT- A17 Mtcre1 mutant Susceptible zone E-MTAB-3007:Mtcre1 noLCO WT001- 3h 3
Mtcre1_noLCO_WT+ A17 Mtcre1 mutant Susceptible zone E-MTAB-3007:Mtcre1 noLCO WT002+ 3h 3
Control wild type A17 5 days Root Hairs control 0h 2
NodFactor_20h wild type A17 5 days Root Hairs Nod Factor 20h 2
NodFactor_4h wild type A17 5 days Root Hairs Nod Factor 4h 2
177_dmi3_+NF Jemalong J5 dmi3 (TRV25) seedling root Nod factor treatment 1hr 3
177_dmi3_ctrl Jemalong J5 dmi3 (TRV25) seedling root control 1hr 3
177_nfp_+NF Jemalong A17 nfp (C31) seedling root Nod factor treatment 1hr 3
177_nfp_ctrl Jemalong A17 nfp (C31) seedling root control 1hr 3
177_wt_+NF Jemalong A17 wt seedling root Nod factor treatment 1hr 3
177_wt_ctrl Jemalong A17 wt seedling root control 1hr 3
Pooja-FN_Shoot A17 22 days after germination shoot Full Nutrition 0.6 mM P; 1.2 mM N beginning at 14 days 2
Pooja-FN-Root A17 22 days after germination root Full Nutrition 0.6 mM P; 1.2 mM N beginning at 14 days 3
Pooja-NoN_Root A17 22 days after germination root No Nitrogen 0 µM N beginning at 14 days 3
Pooja-NoN_Shoot A17 22 days after germination shoot No Nitrogen 0 µM N beginning at 14 days 2
Pooja-NoP_Root A17 22 days after germination root No Phosphorous 0 µM P beginning at 14 days 3
Pooja-NoP_Shoot A17 22 days after germination shoot No Phosphorous 0 µM P beginning at 14 days 2
Salt_Root_No_HM198 HM198 25 days old root No Salt 3
Salt_Root_No_HM309 HM309 25 days old root No Salt 3
Salt_Root_Salt_HM198 HM198 25 days old root Salt - NaCl day 10 = 0.5% NaCl; day 15 = 1% NaCl; day 20 = 1.5% NaCl 3
Salt_Root_Salt_HM309 HM309 25 days old root Salt - NaCl day 10 = 0.5% NaCl; day 15 = 1% NaCl; day 20 = 1.5% NaCl 3
Salt_Shoot_No_HM198 HM198 25 days old shoot No Salt 3
Salt_Shoot_No_HM309 HM309 25 days old shoot No Salt 3
Salt_Shoot_Salt_HM198 HM198 25 days old shoot Salt - NaCl day 10 = 0.5% NaCl; day 15 = 1% NaCl; day 20 = 1.5% NaCl 3