LegumeIP V3
: From Models to Crops - An Integrative Gene Discovery Platform for Translational Genomics in Legumes
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[
M. truncatula
(gene)]
Differential Expression
Experiment
Numerator condition
Denominator condition
Option
Submission
Result
Clean and Start Over
Choose numerator condition (treatment)
31 Rows Page 1/2
Name
Genotype
Mutation
Stage
Tissue/organ
Treatment
Level
Time
Replicate
A17_LCO_WT-
A17
wild type genotype
Susceptible zone
E-MTAB-3007:A17 LCO WT002-
3h
3
A17_LCO_WT+
A17
wild type genotype
Susceptible zone
E-MTAB-3007:A17 LCO WT002+
3h
3
A17_noLCO_WT-
A17
wild type genotype
Susceptible zone
E-MTAB-3007:A17 noLCO WT003-
3h
3
A17_noLCO_WT+
A17
wild type genotype
Susceptible zone
E-MTAB-3007:A17 noLCO WT001+
3h
3
Mtcre1_LCO_WT-
A17
Mtcre1 mutant
Susceptible zone
E-MTAB-3007:Mtcre1 LCO WT003-
3h
3
Mtcre1_LCO_WT+
A17
Mtcre1 mutant
Susceptible zone
E-MTAB-3007:Mtcre1 LCO WT003+
3h
3
Mtcre1_noLCO_WT-
A17
Mtcre1 mutant
Susceptible zone
E-MTAB-3007:Mtcre1 noLCO WT001-
3h
3
Mtcre1_noLCO_WT+
A17
Mtcre1 mutant
Susceptible zone
E-MTAB-3007:Mtcre1 noLCO WT002+
3h
3
Control
wild type A17
5 days
Root Hairs
control
0h
2
NodFactor_20h
wild type A17
5 days
Root Hairs
Nod Factor
20h
2
NodFactor_4h
wild type A17
5 days
Root Hairs
Nod Factor
4h
2
177_dmi3_+NF
Jemalong J5
dmi3 (TRV25)
seedling
root
Nod factor treatment
1hr
3
177_dmi3_ctrl
Jemalong J5
dmi3 (TRV25)
seedling
root
control
1hr
3
177_nfp_+NF
Jemalong A17
nfp (C31)
seedling
root
Nod factor treatment
1hr
3
177_nfp_ctrl
Jemalong A17
nfp (C31)
seedling
root
control
1hr
3
177_wt_+NF
Jemalong A17
wt
seedling
root
Nod factor treatment
1hr
3
177_wt_ctrl
Jemalong A17
wt
seedling
root
control
1hr
3
Pooja-FN_Shoot
A17
22 days after germination
shoot
Full Nutrition
0.6 mM P; 1.2 mM N
beginning at 14 days
2
Pooja-FN-Root
A17
22 days after germination
root
Full Nutrition
0.6 mM P; 1.2 mM N
beginning at 14 days
3
Pooja-NoN_Root
A17
22 days after germination
root
No Nitrogen
0 µM N
beginning at 14 days
3
Pooja-NoN_Shoot
A17
22 days after germination
shoot
No Nitrogen
0 µM N
beginning at 14 days
2
Pooja-NoP_Root
A17
22 days after germination
root
No Phosphorous
0 µM P
beginning at 14 days
3
Pooja-NoP_Shoot
A17
22 days after germination
shoot
No Phosphorous
0 µM P
beginning at 14 days
2
Salt_Root_No_HM198
HM198
25 days old
root
No Salt
3
Salt_Root_No_HM309
HM309
25 days old
root
No Salt
3
Salt_Root_Salt_HM198
HM198
25 days old
root
Salt - NaCl
day 10 = 0.5% NaCl; day 15 = 1% NaCl; day 20 = 1.5% NaCl
3
Salt_Root_Salt_HM309
HM309
25 days old
root
Salt - NaCl
day 10 = 0.5% NaCl; day 15 = 1% NaCl; day 20 = 1.5% NaCl
3
Salt_Shoot_No_HM198
HM198
25 days old
shoot
No Salt
3
Salt_Shoot_No_HM309
HM309
25 days old
shoot
No Salt
3
Salt_Shoot_Salt_HM198
HM198
25 days old
shoot
Salt - NaCl
day 10 = 0.5% NaCl; day 15 = 1% NaCl; day 20 = 1.5% NaCl
3