LegumeIP V3: From Models to Crops - An Integrative Gene Discovery Platform for Translational Genomics in Legumes

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Choose conditions for co-expression analysis

  
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Name Experiment Genotype Mutation Stage Tissue/organ Treatment Level Time replicates
efd_10dpi importance of DNA (de)met ...... Jemalong A17 root nodule Inoculated with S. meliloti 10dpi 3
pDME:DMEi_28dpi importance of DNA (de)met ...... Jemalong A17 root nodule Inoculated with S. meliloti 28dpi 3
pDME:DMEi_9dpi importance of DNA (de)met ...... Jemalong A17 root nodule Inoculated with S. meliloti 9dpi 3
pDME:GUS_28dpi importance of DNA (de)met ...... Jemalong A17 root nodule Inoculated with S. meliloti 28dpi 3
pDME:GUS_9dpi importance of DNA (de)met ...... Jemalong A17 root nodule Inoculated with S. meliloti 9dpi 3
177_dmi3_+NF transcriptome profile of ...... Jemalong J5 dmi3 (TRV25) seedling root Nod factor treatment 1hr 3
177_dmi3_ctrl transcriptome profile of ...... Jemalong J5 dmi3 (TRV25) seedling root control 1hr 3
177_nfp_+NF transcriptome profile of ...... Jemalong A17 nfp (C31) seedling root Nod factor treatment 1hr 3
177_nfp_ctrl transcriptome profile of ...... Jemalong A17 nfp (C31) seedling root control 1hr 3
177_wt_+NF transcriptome profile of ...... Jemalong A17 wt seedling root Nod factor treatment 1hr 3
177_wt_ctrl transcriptome profile of ...... Jemalong A17 wt seedling root control 1hr 3
Pooja-FN_Shoot Macronutrient Deficiencie ...... A17 22 days after germination shoot Full Nutrition 0.6 mM P; 1.2 mM N beginning at 14 days 2
Pooja-FN-Root Macronutrient Deficiencie ...... A17 22 days after germination root Full Nutrition 0.6 mM P; 1.2 mM N beginning at 14 days 3
Pooja-NoN_Root Macronutrient Deficiencie ...... A17 22 days after germination root No Nitrogen 0 µM N beginning at 14 days 3
Pooja-NoN_Shoot Macronutrient Deficiencie ...... A17 22 days after germination shoot No Nitrogen 0 µM N beginning at 14 days 2
Pooja-NoP_Root Macronutrient Deficiencie ...... A17 22 days after germination root No Phosphorous 0 µM P beginning at 14 days 3
Pooja-NoP_Shoot Macronutrient Deficiencie ...... A17 22 days after germination shoot No Phosphorous 0 µM P beginning at 14 days 2
Mt.nodule.T2 Transcriptomic changes in ...... Jemalong A17 8-week-old root nodule Inoculated with S. meliloti;
drought for two (T2) days 		2
Mt.nodule.T4 Transcriptomic changes in ...... Jemalong A17 8-week-old root nodule Inoculated with S. meliloti;
drought for four (T4) days 		2
Mt.root.T0 Transcriptomic changes in ...... Jemalong A17 8-week-old root Medicago truncatula non-inoculated roots;
well-watered control nodules (T0) 		2
Mt.nodule.T0 Transcriptomic changes in ...... Jemalong A17 8-week-old root nodule Inoculated with S. meliloti;
well-watered control nodules (T0) 		2
Salt_Root_No_HM198 Salt Stress HM198 25 days old root No Salt 3
Salt_Root_No_HM309 Salt Stress HM309 25 days old root No Salt 3
Salt_Root_Salt_HM198 Salt Stress HM198 25 days old root Salt - NaCl day 10 = 0.5% NaCl; day 15 = 1% NaCl; day 20 = 1.5% NaCl 3
Salt_Root_Salt_HM309 Salt Stress HM309 25 days old root Salt - NaCl day 10 = 0.5% NaCl; day 15 = 1% NaCl; day 20 = 1.5% NaCl 3
Salt_Shoot_No_HM198 Salt Stress HM198 25 days old shoot No Salt 3
Salt_Shoot_No_HM309 Salt Stress HM309 25 days old shoot No Salt 3
Salt_Shoot_Salt_HM198 Salt Stress HM198 25 days old shoot Salt - NaCl day 10 = 0.5% NaCl; day 15 = 1% NaCl; day 20 = 1.5% NaCl 3
Salt_Shoot_Salt_HM309 Salt Stress HM309 25 days old shoot Salt - NaCl day 10 = 0.5% NaCl; day 15 = 1% NaCl; day 20 = 1.5% NaCl 3
Myc_Ctrl Symbiotic Interactions 1 A17 Seedlings grown on plates root Mock treated 4 Hours 3