LegumeIP V3: From Models to Crops - An Integrative Gene Discovery Platform for Translational Genomics in Legumes

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Choose conditions for co-expression analysis

  
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Name Experiment Genotype Mutation Stage Tissue/organ Treatment Level Time replicates
M-R- effects of rhizobia and m ...... JA17 7 weeks roots no mycorrhizal fungi or rhizobia 8
M-R+ effects of rhizobia and m ...... JA17 7 weeks roots no mycorrhizal fungi but rhizobia present 8
M+R- effects of rhizobia and m ...... JA17 7 weeks roots mycorrhizal fungi present but no rhizobia 7
M+R+ effects of rhizobia and m ...... JA17 7 weeks roots mycorrhizal fungi and rhizobia present 8
line_2A Expression analysis of Mt ...... line 2A 3
Mt_ctrl Expression analysis of Mt ...... control 3
177_dmi3_+NF transcriptome profile of ...... Jemalong J5 dmi3 (TRV25) seedling root Nod factor treatment 1hr 3
177_dmi3_ctrl transcriptome profile of ...... Jemalong J5 dmi3 (TRV25) seedling root control 1hr 3
177_nfp_+NF transcriptome profile of ...... Jemalong A17 nfp (C31) seedling root Nod factor treatment 1hr 3
177_nfp_ctrl transcriptome profile of ...... Jemalong A17 nfp (C31) seedling root control 1hr 3
177_wt_+NF transcriptome profile of ...... Jemalong A17 wt seedling root Nod factor treatment 1hr 3
177_wt_ctrl transcriptome profile of ...... Jemalong A17 wt seedling root control 1hr 3
Pooja-FN_Shoot Macronutrient Deficiencie ...... A17 22 days after germination shoot Full Nutrition 0.6 mM P; 1.2 mM N beginning at 14 days 2
Pooja-FN-Root Macronutrient Deficiencie ...... A17 22 days after germination root Full Nutrition 0.6 mM P; 1.2 mM N beginning at 14 days 3
Pooja-NoN_Root Macronutrient Deficiencie ...... A17 22 days after germination root No Nitrogen 0 µM N beginning at 14 days 3
Pooja-NoN_Shoot Macronutrient Deficiencie ...... A17 22 days after germination shoot No Nitrogen 0 µM N beginning at 14 days 2
Pooja-NoP_Root Macronutrient Deficiencie ...... A17 22 days after germination root No Phosphorous 0 µM P beginning at 14 days 3
Pooja-NoP_Shoot Macronutrient Deficiencie ...... A17 22 days after germination shoot No Phosphorous 0 µM P beginning at 14 days 2
Mtbud Plant Organs A17 5 weeks after transplanting bud 3
Mtlargepod Plant Organs A17 Fully grown green and yellow pods containing seeds harvested at 8 - 10 weeks fruit 3
Mtleafblade Plant Organs A17 5 weeks after transplanting leaf 3
Mtmedpod Plant Organs A17 Medium-sized Pods containing seeds harvested at 8 - 10 weeks fruit 3
Mtopenflower Plant Organs A17 Fully opened flower at 6-7 weeks flower 3
Mtpetiole Plant Organs A17 5 weeks after transplanting petiole 3
Mtroot Plant Organs A17 5 weeks after transplanting root 3
Mtsmallpod Plant Organs A17 Pods containing seeds just forming at 8-10 weeks fruit 3
Mtstem Plant Organs A17 5 weeks after transplanting stalk 3