LegumeIP V3: From Models to Crops - An Integrative Gene Discovery Platform for Translational Genomics in Legumes

Choose numerator condition (treatment)


  Name Genotype Mutation Stage Tissue/organ Treatment Level Time Replicate
CONTROL Jemalong J5 CONTROL 21 days Hairy root 3
TSAR1_OE Jemalong J5 TSAR1 over expression 21 days Hairy root 3
TSAR2_OE Jemalong J5 TSAR2 over expression 21 days Hairy root 3
A17_LCO_WT- A17 wild type genotype Susceptible zone E-MTAB-3007:A17 LCO WT002- 3h 3
A17_LCO_WT+ A17 wild type genotype Susceptible zone E-MTAB-3007:A17 LCO WT002+ 3h 3
A17_noLCO_WT- A17 wild type genotype Susceptible zone E-MTAB-3007:A17 noLCO WT003- 3h 3
A17_noLCO_WT+ A17 wild type genotype Susceptible zone E-MTAB-3007:A17 noLCO WT001+ 3h 3
Mtcre1_LCO_WT- A17 Mtcre1 mutant Susceptible zone E-MTAB-3007:Mtcre1 LCO WT003- 3h 3
Mtcre1_LCO_WT+ A17 Mtcre1 mutant Susceptible zone E-MTAB-3007:Mtcre1 LCO WT003+ 3h 3
Mtcre1_noLCO_WT- A17 Mtcre1 mutant Susceptible zone E-MTAB-3007:Mtcre1 noLCO WT001- 3h 3
Mtcre1_noLCO_WT+ A17 Mtcre1 mutant Susceptible zone E-MTAB-3007:Mtcre1 noLCO WT002+ 3h 3
line_2A line 2A 3
Mt_ctrl control 3
177_dmi3_+NF Jemalong J5 dmi3 (TRV25) seedling root Nod factor treatment 1hr 3
177_dmi3_ctrl Jemalong J5 dmi3 (TRV25) seedling root control 1hr 3
177_nfp_+NF Jemalong A17 nfp (C31) seedling root Nod factor treatment 1hr 3
177_nfp_ctrl Jemalong A17 nfp (C31) seedling root control 1hr 3
177_wt_+NF Jemalong A17 wt seedling root Nod factor treatment 1hr 3
177_wt_ctrl Jemalong A17 wt seedling root control 1hr 3
Pooja-FN_Shoot A17 22 days after germination shoot Full Nutrition 0.6 mM P; 1.2 mM N beginning at 14 days 2
Pooja-FN-Root A17 22 days after germination root Full Nutrition 0.6 mM P; 1.2 mM N beginning at 14 days 3
Pooja-NoN_Root A17 22 days after germination root No Nitrogen 0 µM N beginning at 14 days 3
Pooja-NoN_Shoot A17 22 days after germination shoot No Nitrogen 0 µM N beginning at 14 days 2
Pooja-NoP_Root A17 22 days after germination root No Phosphorous 0 µM P beginning at 14 days 3
Pooja-NoP_Shoot A17 22 days after germination shoot No Phosphorous 0 µM P beginning at 14 days 2