LegumeIP V3: From Models to Crops - An Integrative Gene Discovery Platform for Translational Genomics in Legumes

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Choose conditions for co-expression analysis

  
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Name Experiment Genotype Mutation Stage Tissue/organ Treatment Level Time replicates
HM034_control inoculation of symbiotic ...... HM034 14 dpi root Uninoculated 3
HM034_smedicae inoculation of symbiotic ...... HM034 14 dpi nodule Inoculated by Sinorhizobium medicae (WSM419) 3
HM034_smeliloti inoculation of symbiotic ...... HM034 14 dpi nodule Inoculated by Sinorhizobium meliloti (KH46c) 3
HM056_control inoculation of symbiotic ...... HM056 14 dpi root Uninoculated 3
HM056_smedicae inoculation of symbiotic ...... HM056 14 dpi nodule Inoculated by Sinorhizobium medicae (WSM419) 3
HM056_smeliloti inoculation of symbiotic ...... HM056 14 dpi nodule Inoculated by Sinorhizobium meliloti (KH46c) 3
HM101_control inoculation of symbiotic ...... HM101 14 dpi root Uninoculated 3
HM101_smedicae inoculation of symbiotic ...... HM101 14 dpi nodule Inoculated by Sinorhizobium medicae (WSM419) 3
HM101_smeliloti inoculation of symbiotic ...... HM101 14 dpi nodule Inoculated by Sinorhizobium meliloti (KH46c) 3
HM340_control inoculation of symbiotic ...... HM340 14 dpi root Uninoculated 3
HM340_smedicae inoculation of symbiotic ...... HM340 14 dpi nodule Inoculated by Sinorhizobium medicae (WSM419) 3
HM340_smeliloti inoculation of symbiotic ...... HM340 14 dpi nodule Inoculated by Sinorhizobium meliloti (KH46c) 3
CONTROL TSAR1 and TSAR2 activate ...... Jemalong J5 CONTROL 21 days Hairy root 3
TSAR1_OE TSAR1 and TSAR2 activate ...... Jemalong J5 TSAR1 over expression 21 days Hairy root 3
TSAR2_OE TSAR1 and TSAR2 activate ...... Jemalong J5 TSAR2 over expression 21 days Hairy root 3
Control transcriptome profiling o ...... R108 4th trifolate leaf of 3 week old plant leaf Infiltrated with 35S:MtCOla 4 days post infiltration 3
LAP1 transcriptome profiling o ...... R108 4th trifolate leaf of 3 week old plant leaf Infiltrated with 35S:MtLAP1 4 days post infiltration 3
AM-K RNA-seq of mycorrhizal Me ...... Jemalong A17 root Rhizophagus irregularis;
AM-K 		3
AM+K RNA-seq of mycorrhizal Me ...... Jemalong A17 root Rhizophagus irregularis;
AM+K 		3
NM-K RNA-seq of mycorrhizal Me ...... Jemalong A17 root control;
NM-K 		4
NM+K RNA-seq of mycorrhizal Me ...... Jemalong A17 root control;
NM+K 		4
Salt_Root_No_HM198 Salt Stress HM198 25 days old root No Salt 3
Salt_Root_No_HM309 Salt Stress HM309 25 days old root No Salt 3
Salt_Root_Salt_HM198 Salt Stress HM198 25 days old root Salt - NaCl day 10 = 0.5% NaCl; day 15 = 1% NaCl; day 20 = 1.5% NaCl 3
Salt_Root_Salt_HM309 Salt Stress HM309 25 days old root Salt - NaCl day 10 = 0.5% NaCl; day 15 = 1% NaCl; day 20 = 1.5% NaCl 3
Salt_Shoot_No_HM198 Salt Stress HM198 25 days old shoot No Salt 3
Salt_Shoot_No_HM309 Salt Stress HM309 25 days old shoot No Salt 3
Salt_Shoot_Salt_HM198 Salt Stress HM198 25 days old shoot Salt - NaCl day 10 = 0.5% NaCl; day 15 = 1% NaCl; day 20 = 1.5% NaCl 3
Salt_Shoot_Salt_HM309 Salt Stress HM309 25 days old shoot Salt - NaCl day 10 = 0.5% NaCl; day 15 = 1% NaCl; day 20 = 1.5% NaCl 3