CHROM POS REF ALT DP QUAL AF AC AN TYPE chr1 296104 GACATCAACT G 23477 8998.75 0.06 12 514 INDEL chr1 1248744 AGTTGGGTGTGTG A 3510 17939 0.101 5 516 INDEL chr1 2124890 GTGAAGAGTTT G 3199 21980.6 0.061 33 514 INDEL chr1 2333657 TGATGTA T 8414 2500.39 0.06 12 514 INDEL chr1 2333662 TAGTCGTTGATGTTGTTGTTGATCG T 8438 6423.25 0.063 13 514 INDEL chr1 4223668 GATGGAC G 4531 12510.8 0.075 0 514 INDEL chr1 4223673 ACATGGT A 4526 21055.5 0.098 2 514 INDEL chr1 4272232 CATGCGT C 3244 5058.88 0.168 54 514 INDEL chr1 4597106 A ATCCATG 4738 4202.15 0.059 9 516 INDEL chr1 4797219 CACAACGTA C 3394 16613.8 0.078 36 514 INDEL chr1 4861983 CAAGTAA C 2759 11236 0.065 36 516 INDEL chr1 4872364 CTCTTACACAATTACA C 2837 32424.1 0.113 67 518 INDEL chr1 5264509 CTGCCAAT C 3433 3191.05 0.064 1 514 INDEL chr1 5671740 ATGAGTC A 3340 16031.6 0.069 0 516 INDEL chr1 6186434 GCTAAAACATGTTATCATCAA G 14525 4631.41 0.073 13 522 INDEL chr1 6319953 TGGAGGAGAA T 3516 11695.3 0.05 20 514 INDEL chr1 6443473 A ATAGATCT 3050 15466.2 0.087 0 514 INDEL chr1 6444356 C CACACAAT 2906 12383.9 0.065 2 516 INDEL chr1 7109850 ATAGACATC A 2281 12700.2 0.053 0 514 INDEL chr1 7918267 TGTCAGC T 3575 26509.4 0.111 64 516 INDEL chr1 8203689 C CAAAACAAAG 3447 191133 0.825 485 514 INDEL chr1 8206896 CTTTGGGAGCAGA C 3520 40858.4 0.084 51 514 INDEL chr1 8577869 GATCAC G 3582 15722 0.087 0 518 INDEL chr1 8800701 TTGTGCTTGA T 6000 50373.3 0.104 52 520 INDEL chr1 11458621 GCATCACCATCATCATCATCATCATCATCAT G 3680 5714.43 0.051 13 514 INDEL chr1 11918818 T TCAAATA 3364 27805.9 0.218 93 514 INDEL chr1 14815039 TGAATATGC T 6818 1347.65 0.082 10 520 INDEL chr1 15613811 GATCAGGAATGCA G 3647 27260 0.06 0 518 INDEL chr1 16911802 GTCTCTGGC G 4760 15275.6 0.077 1 518 INDEL chr1 17903969 GTTGTTGAAA G 3324 2336.01 0.052 6 518 INDEL chr1 17904002 C CTAAGTTGT 3510 3623.27 0.109 12 516 INDEL chr1 17904066 C CCTATTTGCT 3828 6367.76 0.097 17 520 INDEL chr1 17904067 T TTATTTGCTC 3824 9384.51 0.087 17 520 INDEL chr1 20852833 ATTATTAT A 11333 2061.78 0.104 16 522 INDEL chr1 20957921 ATGCAACTTCGACGTGACTC A 3101 7668.81 0.054 24 514 INDEL chr1 21181720 TGTTGTTGAGTGA T 5464 8628.81 0.074 9 514 INDEL chr1 22944664 ATGCAT A 4081 9136.42 0.053 0 514 INDEL chr1 22944673 ATTGCG A 4243 6997.47 0.059 0 516 INDEL chr1 23020964 ACTGTTT A 3173 10313.9 0.06 38 516 INDEL chr1 23811793 GTATAGTCTGGAC G 2942 11408 0.055 33 516 INDEL chr1 26307066 T TTGACAC 4536 38528.4 0.258 109 518 INDEL chr1 26597655 TCACCATCATCAA T 3555 31487.6 0.111 7 514 INDEL chr1 26597658 CCATCATCAACAT C 3526 26362.6 0.099 2 514 INDEL chr1 26648600 GAACTT G 3450 25910 0.17 98 514 INDEL chr1 26777359 TGTGTCCG T 2649 37380.7 0.228 100 514 INDEL chr1 26794981 CCAGAGGAATA C 5615 8448.32 0.065 7 520 INDEL chr1 26794994 GAGGAACACAT G 5567 10638.1 0.063 7 520 INDEL chr1 26964915 AGTTCCTTGT A 3546 32619.4 0.114 66 514 INDEL chr1 26965930 TGATGTG T 5920 47219.2 0.119 68 518 INDEL chr1 27049302 ACATTTTGGCGAACTCCG A 2676 29656.1 0.083 48 514 INDEL chr1 27764975 A AATAAGGCAC 3750 28199.4 0.078 2 514 INDEL chr1 27969170 AATTTG A 2491 136200 0.943 489 520 INDEL chr1 27969171 ATTTGAT A 2475 58026.7 0.858 476 520 INDEL chr1 28080088 CTTGACCAT C 7453 147655 0.239 128 516 INDEL chr1 28325784 TCTCTGA T 3249 11600 0.075 41 518 INDEL chr1 28446292 T TTGCCAC 3914 3580.16 0.155 17 518 INDEL chr1 29135520 ATCTTCG A 3259 27341.2 0.166 92 514 INDEL chr1 31569381 CCTGAA C 3550 142430 0.612 322 516 INDEL chr1 32393827 AGCCTGGTAG A 3348 22887.2 0.084 47 518 INDEL chr1 32393829 CCTGGTAGGG C 3302 31691.7 0.109 53 514 INDEL chr1 33420625 C CGATTGATT 8491 5319.64 0.051 1 520 INDEL chr1 33762869 G GCTAGTTC 46361 46970.6 0.064 9 524 INDEL chr1 34118063 TGATCCATCACCACCATCGTGACC T 4819 31357.3 0.066 21 516 INDEL chr1 34745040 CTGTTCCTTTTACCTA C 2929 32162.7 0.069 1 514 INDEL chr1 35150657 TTGGAGTCTG T 2571 11784.3 0.094 54 514 INDEL chr1 35505738 CCTCTTGTCAGTGGCGAGTTGAAAATGCTGT C 4285 17213 0.113 11 518 INDEL chr1 37075484 TGGTCGAGGGTATAGTCAA T 4021 41140.4 0.066 1 514 INDEL chr1 37481322 GCACACACATGCGTTAGTTGGA G 2948 375257 0.781 449 516 INDEL chr1 37481329 CATGCGTTAGTTGGACACACACAT C 2906 301574 0.717 448 516 INDEL chr1 37941528 TGAAGAATCATCA T 3131 29268.7 0.057 1 514 INDEL chr1 38979100 GATGGTTCAGAT G 4264 19146 0.083 45 518 INDEL chr1 39907642 GAGAGAT G 3869 2138.72 0.052 1 514 INDEL chr1 41920590 TCCTAA T 3497 14939.2 0.122 7 514 INDEL chr1 42414326 C CCACTAAA 3064 25286.2 0.173 92 516 INDEL chr1 42464060 TGTCTGGG T 5772 26866.5 0.061 1 518 INDEL chr1 42701899 GTAAAAGAAC G 2433 25778.4 0.261 60 514 INDEL chr1 42701901 AAAAGAAC A 2388 14593.6 0.14 30 516 INDEL chr1 42701935 T TGAAGAAGAA 2637 4250.84 0.065 1 518 INDEL chr1 44142708 CAATACTCTACCCCTA C 3596 31841.1 0.057 1 516 INDEL chr1 44229865 TACAGG T 4953 10921.4 0.054 0 518 INDEL chr1 44229869 GGACAT G 4969 19910.1 0.076 1 516 INDEL chr1 44402817 A ACATTCA 3548 10154.4 0.174 67 514 INDEL chr1 45435281 ATCAGAC A 4896 19207.3 0.115 47 516 INDEL chr1 45435292 ACTCAGG A 4841 12001.5 0.096 43 516 INDEL chr1 45435294 TCAGGTA T 4837 1982.85 0.062 10 516 INDEL chr1 45436993 TATTCACTTAAG T 3499 24081.4 0.099 47 516 INDEL chr1 45705614 ATCAGATAG A 2837 17249 0.061 2 514 INDEL chr1 46425799 AGCGTT A 3081 2295.88 0.063 1 514 INDEL chr1 49081037 AGGAGAC A 4256 26633.1 0.054 1 520 INDEL chr1 49952032 TCCTCCTCCA T 4454 8832.59 0.086 0 516 INDEL chr1 50209742 GCTCGC G 6012 2289.82 0.061 13 520 INDEL chr1 50779929 TCTTGATC T 2930 7672.04 0.052 3 514 INDEL chr1 51323434 AGACAGCTTC A 4447 1240.75 0.051 10 514 INDEL chr1 51420572 CCATGGT C 3329 1682.87 0.065 12 516 INDEL chr1 52156819 TCGGTGTCGGTA T 3630 33735.1 0.079 5 516 INDEL chr1 52156821 GGTGTCGGTACC G 3634 26864.6 0.076 4 514 INDEL chr1 52565720 CGAGTTAT C 4032 56678 0.189 106 518 INDEL chr2 343558 GTGATC G 4133 23797.9 0.066 0 514 INDEL chr2 444410 GGGTCT G 2604 1211.02 0.072 18 522 INDEL chr2 2061891 TCGTGTTTTGTTGTC T 4464 57731.9 0.121 54 514 INDEL chr2 2486374 ATGGTGAGTATCT A 4328 30026.5 0.082 3 514 INDEL chr2 2974010 ACAGCACTAGCAG A 6117 17559.3 0.053 32 522 INDEL chr2 5051742 CGCCAACATAT C 3381 9544.37 0.063 16 514 INDEL chr2 5051743 GCCAACATATA G 3352 12510.2 0.074 18 514 INDEL chr2 5161985 C CCGGTAA 3931 17817.8 0.064 1 518 INDEL chr2 5299365 AGCGTGT A 4265 23867.3 0.069 0 514 INDEL chr2 7336822 TCATCGC T 4137 11574.4 0.056 0 518 INDEL chr2 7336834 TCTTCTG T 4086 3335.63 0.062 0 514 INDEL chr2 7336842 TGCTGCTTCTTCA T 4097 12116.4 0.07 1 516 INDEL chr2 7336845 TGCTTCTTCA T 4117 18440.9 0.087 1 516 INDEL chr2 7348459 ATCAACATCAACATCAACATCATCG A 6482 12375.8 0.09 14 514 INDEL chr2 7657775 GTGGTGGTAA G 3807 28771.5 0.166 72 514 INDEL chr2 7657778 GTGGTAA G 3805 17426.3 0.163 72 514 INDEL chr2 7977729 AGGACTTGAAAACGG A 3563 31102.3 0.058 3 518 INDEL chr2 8301226 A AGGATGTG 3170 9488.3 0.101 0 514 INDEL chr2 8350594 GTGGTGCTGT G 3903 17183 0.077 46 516 INDEL chr2 8350624 AAGGTTATGGTGC A 4197 16646.4 0.065 39 520 INDEL chr2 9445391 AGGTGAAAGCTCC A 2715 24950.4 0.091 51 514 INDEL chr2 9469113 GGCATTGTTGTAGTGAATGAAGT G 3141 44506.1 0.091 49 514 INDEL chr2 9654577 TTGGTGAC T 3377 1256.46 0.052 5 516 INDEL chr2 10102384 T TGAATTATA 15513 2171.96 0.05 2 522 INDEL chr2 10445615 G GATTTA 3652 1706.63 0.053 14 514 INDEL chr2 11481089 ATCATGAACC A 2443 8491.96 0.05 2 518 INDEL chr2 12101741 GAAGGA G 3715 11931.1 0.067 0 514 INDEL chr2 12628345 ATCGTGCTGT A 6529 2157.95 0.064 5 522 INDEL chr2 14418565 GACTTAGAAGCAAA G 3230 20885.7 0.056 34 522 INDEL chr2 14645353 CACGGCA C 4323 16392.4 0.073 11 516 INDEL chr2 14759873 AGGCAATGTAAC A 3101 33915.4 0.124 74 516 INDEL chr2 15313016 G GACACTAAC 2993 19461.3 0.092 1 516 INDEL chr2 15805216 A AGAAAAT 3021 9668.31 0.089 2 514 INDEL chr2 15815619 GCAGTGGGACCTACAT G 5007 25235.6 0.066 26 518 INDEL chr2 15946565 A ACAAAT 9554 2723.63 0.063 9 514 INDEL chr2 15947733 ATATTC A 7701 2690.92 0.051 4 522 INDEL chr2 16253736 ATAGTTCCCAAGCTTTCACCCGG A 3266 2710.93 0.079 1 516 INDEL chr2 17786097 ACAACAATTTT A 3203 17036.7 0.084 45 514 INDEL chr2 18217058 TCAGTTTCAGGATGAATAGGCA T 2955 17877.8 0.052 28 514 INDEL chr2 19395874 CATCAGT C 3504 20012.5 0.118 64 514 INDEL chr2 19803609 AACAACGACG A 10543 2322.68 0.061 18 514 INDEL chr2 20357178 AGGAGGAGGATCC A 5018 11260 0.052 11 518 INDEL chr2 20357188 TCCGGAGGAGGAC T 4986 10085.5 0.051 11 518 INDEL chr2 20670535 ACAACAT A 4871 1272.23 0.05 0 516 INDEL chr2 21240440 TTGTTA T 10592 4163.4 0.064 13 524 INDEL chr2 21696219 AATAGAC A 5059 2266.36 0.051 10 520 INDEL chr2 21696600 CAATAT C 8602 685.36 0.057 5 520 INDEL chr2 22953503 TTTTTC T 24715 2118.67 0.055 13 522 INDEL chr2 23104532 C CGAGGA 3625 1689.27 0.085 12 516 INDEL chr2 23374752 ACAACAACTCACT A 7748 2345.13 0.054 11 522 INDEL chr2 24670773 CTCTTA C 8924 1254.73 0.052 12 520 INDEL chr2 25140998 AACAACTTAG A 4935 3869.84 0.053 6 516 INDEL chr2 25434379 ATCAGGAT A 3100 19462.3 0.1 2 514 INDEL chr2 25877756 GATTGATGATT G 3137 23074.8 0.112 62 516 INDEL chr2 27397148 CCAAGAATG C 22077 4175.47 0.061 10 524 INDEL chr2 27673918 TCTATGGA T 2684 14578.3 0.06 1 516 INDEL chr2 28040604 CTGCACAGT C 4447 1306.97 0.074 6 514 INDEL chr2 28367199 ATAGTCCTTT A 3105 60235.6 0.245 139 516 INDEL chr2 29711077 AAGTGTTGTGAAAAGTGATGTGTACC A 4780 12799.7 0.05 0 520 INDEL chr2 29900171 AGAGGAGGAGGCAGAGGAT A 3534 18948.1 0.054 28 514 INDEL chr2 32263514 GATGAATAGTGCT G 4664 5945.72 0.055 5 514 INDEL chr2 32642009 CGTGGTCGTGGTG C 3810 35550.6 0.114 68 516 INDEL chr2 32642020 TGGTGGA T 3661 6721.21 0.096 64 514 INDEL chr2 32664981 AAAGAAAGTAACTGTT A 2918 47258.7 0.113 63 514 INDEL chr2 32772684 GTTGAAGAACATCATCAAA G 3594 25855.7 0.061 7 518 INDEL chr2 32915903 TCTGCGTCA T 3233 20040.7 0.09 3 514 INDEL chr2 32915905 TGCGTCA T 3238 11744.5 0.078 1 514 INDEL chr2 34555988 AGTCAAATGGT A 3108 20287.8 0.088 52 516 INDEL chr2 34919685 TACACATGACTACCTAAGCCAGAGC T 4393 40501.3 0.064 38 518 INDEL chr2 35144112 AAAAAG A 6348 1951.29 0.065 9 518 INDEL chr2 35144114 AAAGAAT A 6018 1477.32 0.068 9 518 INDEL chr2 35144115 AAGAAT A 5874 2049.3 0.084 11 516 INDEL chr2 35300011 T TATGCTA 5922 652.59 0.058 1 518 INDEL chr2 35679946 A ACGTTTC 3315 15767.3 0.088 18 514 INDEL chr2 35711698 ACAAAC A 4509 22229.4 0.063 2 514 INDEL chr2 35973483 AATCCGATTCGATCAACG A 2865 44074.3 0.11 59 518 INDEL chr2 35973486 CCGATT C 2866 12639.5 0.167 93 516 INDEL chr2 36161866 GGTGCCATC G 2751 9996.76 0.062 0 518 INDEL chr2 36161870 CCATCGATA C 2757 9089.67 0.059 0 516 INDEL chr2 36536357 AAAAACAGAG A 3168 2984.24 0.141 19 516 INDEL chr2 38711064 TTGTGTTGGGGAG T 6158 73895.3 0.148 70 514 INDEL chr2 40023575 CTTTCTT C 2711 7407.92 0.081 23 514 INDEL chr2 40164842 AGGAGAAAGAAAATG A 2456 24162.7 0.067 3 514 INDEL chr2 40164844 GAGAAAGAAAATGGA G 2435 27196.6 0.084 3 514 INDEL chr2 40164846 GAAAGAAAATGGAAGA G 2430 21573 0.084 3 514 INDEL chr2 40570694 C CGAGTTT 3218 17291 0.105 60 514 INDEL chr2 40610438 GTTCATTCATT G 3914 295203 0.817 459 516 INDEL chr2 40610442 ATTCATT A 3806 148543 0.819 459 516 INDEL chr2 40880740 TGGGAA T 3701 1765.16 0.068 13 514 INDEL chr2 41894039 CCTAGTAGAGAGTGGGGAAACGGAAAGCCAT C 3948 6208.54 0.102 14 516 INDEL chr2 42179679 GGTGAATA G 10845 1114.23 0.064 11 516 INDEL chr2 42450204 GTTCAACAGT G 4046 28875.7 0.054 1 520 INDEL chr2 42556840 A AGACAT 5121 44630.1 0.197 111 514 INDEL chr2 42572313 CAATTTTT C 7792 2866.61 0.07 11 518 INDEL chr2 42616712 CGCTATAGT C 3376 13466.2 0.056 3 516 INDEL chr2 42757770 G GAGACGCT 3125 15021.3 0.057 2 522 INDEL chr2 43018150 TTAACAAGCTTCTCAGCAACAAGCTTCTCAA T 3304 3098.86 0.08 9 514 INDEL chr2 44029260 AAACAGGTTC A 3036 31351.4 0.141 82 514 INDEL chr2 44074543 T TTGGACAAG 4361 19796.7 0.05 1 518 INDEL chr2 45441806 C CAGCAGCAGA 2498 9174.67 0.05 2 516 INDEL chr2 45559584 C CTGTTTG 2760 14313 0.12 77 514 INDEL chr3 452475 TCCTCCA T 4800 22974.4 0.089 14 514 INDEL chr3 1619538 TCTGTCTTCATGAAGAATTCCCTTGGTCA T 3705 26900.8 0.065 37 514 INDEL chr3 1734277 ATGTTTTC A 2756 903 0.052 11 514 INDEL chr3 1782031 ATACCTCAAG A 2534 15489.3 0.058 8 514 INDEL chr3 3180849 CCGTGTT C 2106 18130.8 0.149 54 514 INDEL chr3 3664044 A AGCCCCATCT 2589 271.15 0.052 2 514 INDEL chr3 4290524 AAACAT A 8574 1044.13 0.079 12 520 INDEL chr3 4424183 CCGTCTA C 11696 5478.74 0.052 6 522 INDEL chr3 4790311 TTCATTCA T 13953 3273.78 0.075 13 522 INDEL chr3 4790312 TCATTCA T 13865 2809.65 0.075 8 522 INDEL chr3 7194400 AGCAGGATGAGAT A 3386 192232 0.536 285 516 INDEL chr3 7631817 CAACACG C 6415 3385.03 0.074 12 516 INDEL chr3 8062370 CGTGAATGCGGTTATG C 7581 2611.88 0.05 15 518 INDEL chr3 8218206 AAATGAAAAAATG A 9068 1546.38 0.053 5 520 INDEL chr3 8218213 AAAATG A 9028 4806.29 0.118 10 524 INDEL chr3 9098434 TCCCTCAAATTA T 7868 37635.6 0.064 8 518 INDEL chr3 9626037 C CCATCTCT 3575 10305.9 0.068 41 514 INDEL chr3 11506404 CACATAGTT C 2901 25339.5 0.105 53 516 INDEL chr3 11941107 C CCCTCTT 10213 1528.1 0.105 7 522 INDEL chr3 13032027 CTTATGATGTTGA C 5965 5036.71 0.06 12 514 INDEL chr3 13729248 GGTGGTA G 3884 56906.6 0.181 104 516 INDEL chr3 13746869 T TTTTTTC 7351 1911.38 0.103 16 524 INDEL chr3 14021170 A ACAAGGCGAG 3426 44917.2 0.159 47 514 INDEL chr3 14021172 A AAGGCGAGCG 3485 36011.6 0.151 45 516 INDEL chr3 14193411 CATGCGG C 4069 150710 0.637 356 514 INDEL chr3 14420533 CTATGT C 14824 1179.56 0.054 7 522 INDEL chr3 15531879 GTGACAA G 4776 1254.77 0.051 7 514 INDEL chr3 15867566 T TGAGAAGA 4197 44057.4 0.085 0 516 INDEL chr3 15886417 AAATTTC A 11333 1186.68 0.053 3 524 INDEL chr3 15920196 GAACTGTCAT G 8778 3151.49 0.077 11 522 INDEL chr3 16744554 GTTGAAT G 5099 3892.5 0.061 11 522 INDEL chr3 16878568 GTTGGCCTCGAAACA G 3980 38648.6 0.058 34 514 INDEL chr3 16923002 GCTTCTATTTCTT G 3858 11274.5 0.05 10 518 INDEL chr3 19282554 G GGCTGGT 3389 8419.97 0.072 39 514 INDEL chr3 20249181 TTGTCGTTCAAAACGATGGAGCACTA T 4686 3980.75 0.061 11 516 INDEL chr3 20263977 G GTCTCC 2828 13912.2 0.098 10 514 INDEL chr3 20353463 CATGGCTG C 6149 15510.8 0.065 21 520 INDEL chr3 20471395 TCTGATACCGATG T 3351 8093.33 0.137 22 514 INDEL chr3 20471397 TGATACC T 3314 3772.63 0.069 20 514 INDEL chr3 21613487 AAATAC A 14708 2371.39 0.099 11 524 INDEL chr3 23174424 AACAACAACGACG A 3183 1135.39 0.051 8 514 INDEL chr3 24133874 GCCTGA G 8215 1510.14 0.056 15 514 INDEL chr3 26620462 CTGACT C 6295 57322.8 0.202 82 520 INDEL chr3 26620655 CTTAACG C 4581 56088.2 0.253 89 516 INDEL chr3 28109113 GGTTGGTTT G 13083 1467.29 0.054 19 516 INDEL chr3 28987649 CGTGTCCG C 3443 47267.1 0.19 110 518 INDEL chr3 29095881 CGTAAGAAGAT C 2937 29645.7 0.063 3 514 INDEL chr3 29550867 ACGACTC A 4448 894.06 0.073 7 520 INDEL chr3 29788405 TCCTGAC T 5174 27790.5 0.073 43 514 INDEL chr3 30091437 ATATTCT A 3664 1898.55 0.075 20 516 INDEL chr3 30206738 TTGAGTG T 3374 1809.67 0.06 13 514 INDEL chr3 30873403 C CGGGTCCCAT 5543 6757.58 0.084 34 518 INDEL chr3 31424022 T TTTTGGTG 4213 5170.21 0.086 3 514 INDEL chr3 35374483 TATCACC T,TATCACCATCACC 3541 128674 0.063,0.136 14,58 516 INDEL chr3 37621981 A ATGTGTTCT 4818 26703.1 0.096 1 518 INDEL chr3 37621983 G GTGTTCTTA 4875 22125.1 0.098 0 520 INDEL chr3 39275387 TCCATGACCATGA TCCATGA,T 4128 73973.6 0.154,0.093 88,35 514 INDEL chr3 39275676 T TTGCCAG 5474 22207.3 0.058 0 514 INDEL chr3 39734374 GGATTCTTGATGTTGATGCCATGTTCTTGAT G 4162 40086.8 0.066 2 518 INDEL chr3 39734379 CTTGATG C 4076 3874.05 0.05 3 514 INDEL chr3 39803245 T TTTGAAA 3720 19200.4 0.065 1 518 INDEL chr3 40143001 TGAGCATCATGATATATCATACCGCGTC T 3073 50570.3 0.124 70 514 INDEL chr3 41324865 AATGCCACCTGGAAAC A 4792 24608.9 0.054 27 520 INDEL chr3 42722489 GCAGGAGCTT G 4353 4414.67 0.051 4 514 INDEL chr3 44380984 TCAACACCTTCAA T 3560 20014.7 0.051 1 516 INDEL chr3 44641508 ACACCAGAAG A 2668 21808 0.075 7 514 INDEL chr3 45312653 GTTCCTC G 2862 29255.7 0.13 78 518 INDEL chr3 45804571 GTTGTTGTCGTTGCA G 6340 5201.8 0.083 10 522 INDEL chr3 46456250 TCATTCACCTCCTCCACCAGTA T 8586 22923.8 0.085 7 524 INDEL chr3 46490004 AAGAATCTCACCGGAACAAGAAC A 3736 21959.5 0.05 17 516 INDEL chr3 46742813 CTTGTGGTGGTT C 4113 33551.3 0.099 58 514 INDEL chr3 47234807 T TCTTGCTGC 3580 4892.64 0.072 1 518 INDEL chr3 48028523 AGCCATAACCAGC A 4586 34288.1 0.102 61 516 INDEL chr3 48122188 C CACCAGAAG 3107 14906.8 0.081 1 518 INDEL chr3 48536459 AAAGCT A 3390 16276.9 0.064 3 514 INDEL chr3 48565803 C CGGATGGT 4328 3322.7 0.053 0 518 INDEL chr3 49446449 GTGATATAGCTCTGTGTTGCTGAAGT G 3395 53717.2 0.076 42 518 INDEL chr3 50235136 G GCTCCGGCAA 4391 17371.4 0.226 99 516 INDEL chr3 50235138 T TCCGGCAACA 4485 48596 0.202 93 516 INDEL chr3 50262576 T TTGTCTC 3306 509.74 0.078 9 514 INDEL chr3 50295436 TGTTCGGTTTA T 2802 29668.8 0.154 62 516 INDEL chr3 51332294 G GTTGGA 2274 12760.3 0.066 2 514 INDEL chr3 51361749 ATTTCTC A 2699 6740.92 0.053 28 514 INDEL chr3 52131241 TCCAAATTCGC T 3587 4522.48 0.063 12 518 INDEL chr3 52507609 CTAACGG C 3134 3364.29 0.209 98 514 INDEL chr3 52860321 G GCAGCAA 3687 6770.97 0.05 0 514 INDEL chr3 54331573 AGTTGATGTCGAT A 4358 12932.2 0.05 1 516 INDEL chr3 54406176 GATAATTTTGTTGTAGTTATCT G 2838 20414.2 0.052 29 514 INDEL chr4 60290 AAAATGTCATC A 2467 34717.8 0.177 103 514 INDEL chr4 496548 T TACTAGG 67381 163062 0.066 2 524 INDEL chr4 3384588 TGAAAA T 5524 1268.58 0.062 11 520 INDEL chr4 5012501 GAATGA G 14606 3353.33 0.069 11 522 INDEL chr4 7304591 TGCTCTTGGG T 3703 9312.72 0.051 20 516 INDEL chr4 9574146 TGTGAAGAAG T 2984 25659.3 0.106 53 514 INDEL chr4 9574151 AGAAGGT A 2962 13760.6 0.11 52 514 INDEL chr4 10264658 TTACAAGCCACCTGTAGAGAAACCTCCGGTG T 7941 10353.7 0.068 9 522 INDEL chr4 10275871 TTTTTC T 3511 1250.75 0.052 1 518 INDEL chr4 12364761 A AATATC 42877 293083 0.091 41 518 INDEL chr4 12615578 GTGAATGTATGAATACA G 4547 20757.1 0.051 25 522 INDEL chr4 12615593 CATGAATGTATGT C 4259 28080.3 0.064 31 522 INDEL chr4 13434397 TCACTGC T 4715 17472.1 0.088 53 518 INDEL chr4 13828307 TCTGCCA T 6216 21460.8 0.084 0 516 INDEL chr4 13828311 CCACAGA CCACAGACACAGA,C 6204 69093.8 0.098,0.08 47,0 514 INDEL chr4 15276274 TTTTTCA T 6732 2167.71 0.078 3 522 INDEL chr4 15283108 A AGCACT 5793 1536.55 0.096 6 520 INDEL chr4 15989608 AACAACGACG A 9379 5549.96 0.081 15 520 INDEL chr4 15989648 A ACTCACT 8667 485.32 0.057 7 522 INDEL chr4 15989654 ACTCACT A 9010 1367.19 0.078 12 520 INDEL chr4 15989669 ACAACAACAACTTAAT A 10043 2412.12 0.053 8 520 INDEL chr4 16361591 ATTTAT A 4442 1421.97 0.055 11 514 INDEL chr4 18061110 AAGGTTC A 55367 12101.1 0.056 10 518 INDEL chr4 18181905 CTAAAA C 34362 154171 0.117 0 514 INDEL chr4 18181906 TAAAATA T 34459 248550 0.14 2 514 INDEL chr4 18181910 ATAAAAAT A 34751 121898 0.108 0 514 INDEL chr4 18181912 AAAAAT A 35023 161373 0.134 0 514 INDEL chr4 18181917 TAAAAAG T 35775 154116 0.117 1 516 INDEL chr4 18380414 GCAACAACCCACACTA G 3196 10422.3 0.07 33 514 INDEL chr4 18380424 ACACTACAACAACC A 3208 11968.5 0.071 33 514 INDEL chr4 19195116 GGTTTA G 3133 12002.4 0.081 47 514 INDEL chr4 20409130 ATATTCATC A 3575 17318.5 0.061 0 518 INDEL chr4 20749701 TTGAAATGTG T 3495 20048.5 0.092 49 514 INDEL chr4 21149802 GCTGATA G 3522 7792.19 0.152 51 514 INDEL chr4 21155387 AAAGAATAGGAACGGGGAGAGT A 2844 43763.7 0.099 55 516 INDEL chr4 21446351 CAGAGGATTGATA C 2702 21756.8 0.088 48 514 INDEL chr4 23177240 G GCCAGGA 4238 14885.2 0.111 37 514 INDEL chr4 23485157 GTATTCCTAATCTGAAGAAGTTGTATGATA G 3516 43053.7 0.056 1 514 INDEL chr4 23700435 T TACAGAC 2431 4707.18 0.068 0 514 INDEL chr4 23700437 C CAGACAT 2443 1661.09 0.068 0 514 INDEL chr4 23798328 G GTCGCCACCA 2314 13309.2 0.111 0 520 INDEL chr4 25338870 ATTGCCGCCACTGT A 3347 292549 0.72 416 514 INDEL chr4 25871464 CCGTTGT C 4901 16861.6 0.068 38 514 INDEL chr4 26922877 C CATTGTT 3513 3600.55 0.092 2 518 INDEL chr4 26922881 G GTTGCTT 3563 4926.46 0.07 0 516 INDEL chr4 27000786 A AAATAAATG 2504 121499 0.783 462 516 INDEL chr4 27027958 CAACAACATA C 5761 3096.04 0.057 12 518 INDEL chr4 27868606 GTCCGATCGAGTAAGGATGTGCAAACAAAAA G 2568 20071.2 0.055 29 518 INDEL chr4 28342753 AACTCCTGGT A 3746 13154.1 0.09 48 514 INDEL chr4 28730485 CCCATCAAGAGCA C 4658 40413.1 0.091 55 516 INDEL chr4 29813846 ATGATGATGATGT A 3861 31766.9 0.091 54 516 INDEL chr4 29851942 GAGCGAATCC G 5344 45210.6 0.149 73 518 INDEL chr4 30729702 C CCAGCACCAT 4057 4585.55 0.05 1 514 INDEL chr4 31335920 A AAAAAAT 2791 1978.83 0.062 19 514 INDEL chr4 31737096 ACAGACAGCAGTAGCGCACC A 3544 42752.5 0.111 64 514 INDEL chr4 32030831 CTTTCATGTTGAAAT C 2849 35391.7 0.06 35 514 INDEL chr4 32124826 A ATGTTAT 3771 11290.9 0.069 1 514 INDEL chr4 33014474 AGGTCGT A 3315 5271.17 0.063 16 516 INDEL chr4 33014480 TGGTCGA T 3399 8889.11 0.058 19 516 INDEL chr4 33368136 TGGAGGAGGATGGGGC T 3320 23743.3 0.076 45 518 INDEL chr4 33593753 CCACCACCAA C 3667 30867.9 0.098 3 518 INDEL chr4 33848351 CCACAAT C 15696 1539.83 0.068 15 514 INDEL chr4 33938305 A AAACCAG 4230 5926.44 0.062 14 516 INDEL chr4 34085676 ACCATGTGAAAGCAAG A 2859 68990.9 0.16 87 514 INDEL chr4 35731978 ACTCTCCATTATCACACAATGG A 3251 36609.8 0.106 61 514 INDEL chr4 36588498 GGGCTGTGCTTGCATT G 4490 33601.8 0.053 3 520 INDEL chr4 37105206 CCACCATT C 2713 3074 0.063 11 516 INDEL chr4 37504196 G GAATGTAGCA 2477 3263.67 0.05 2 516 INDEL chr4 37834469 GACTCC G 2575 8186.56 0.055 32 514 INDEL chr4 37967551 TAGAATCATGAAAGG T 3696 11582.8 0.055 1 514 INDEL chr4 38500874 AGTAGGC A 4305 17155.9 0.068 37 518 INDEL chr4 38801506 GGTGATGATC G 6051 40400.2 0.056 1 516 INDEL chr4 39281416 ACTCAATCCATC A 4865 36218.6 0.094 40 518 INDEL chr4 39811815 TTATGGGGACTTGCCCCCACACGTGGATG T 3651 40060.8 0.092 46 520 INDEL chr4 40367090 AAGCAAG A 4278 20624.6 0.069 2 522 INDEL chr4 40800120 TCAGTG T 3935 6385.71 0.051 25 514 INDEL chr4 41566512 T TTCCGCC 4614 23179.9 0.087 27 516 INDEL chr4 41566584 ACACACACATCATACATCG A 3643 71604.8 0.168 98 516 INDEL chr4 41758137 TAGACACA T 2881 12982.7 0.084 48 514 INDEL chr4 42458945 CCCTCATTATCAG C 3641 29349.8 0.07 39 514 INDEL chr4 43889701 CCTCCTTGTGTCTCTGGGGTTGA C 5767 2585.63 0.088 15 520 INDEL chr4 44177008 CAGTACTCAGT C 2294 12115.5 0.097 0 514 INDEL chr4 45959879 TGCATTTATG T 5376 2925.91 0.058 6 516 INDEL chr4 46740231 AACAATTTATACG A 3748 2088.82 0.07 11 514 INDEL chr4 47253561 ACCACGTGT A 2812 14851 0.054 0 518 INDEL chr4 47647252 TGTGGAAGGAC T 3955 2771.33 0.051 10 514 INDEL chr4 48074936 GAGCTGAGCTTAGATTAGCCTCTCTTAT G 3484 12330 0.05 0 514 INDEL chr4 48074939 CTGAGCTTAGATTAGCCTCTCTTATAAG C 3423 11052.9 0.05 0 516 INDEL chr4 48572463 CTGCTGCTGATGT C 4578 16616.9 0.075 25 514 INDEL chr4 48572469 CTGATGT C 4605 8945.02 0.106 26 516 INDEL chr4 48572739 A ACCACCTCCG 3375 2236.41 0.064 0 514 INDEL chr4 49563462 GGAGGTAACAACA G 3145 26500.6 0.055 2 518 INDEL chr4 50192899 G GACTCAGAC 2087 2324.69 0.07 2 514 INDEL chr4 50858914 ACATGCACCAACACAACTGT A 3735 40938.4 0.061 1 514 INDEL chr4 51149534 C CCCTGA 2293 7098.18 0.055 0 514 INDEL chr4 52477441 GGCGACTGA G 7826 5289.08 0.07 15 514 INDEL chr4 52483981 G GTCTGAC 3922 19105.9 0.06 1 518 INDEL chr4 52484078 ACTCGGACTCTGACTCTAG A 4006 52678.2 0.101 2 514 INDEL chr4 52484095 AGCTCTG A 3855 10002.3 0.106 1 514 INDEL chr4 52761087 TTGCTTGCAG T 4873 16694.6 0.056 7 520 INDEL chr4 53020546 CAACTACTACGACATCTACTTCTGCCGGAG C 3895 75393.6 0.13 35 514 INDEL chr4 53706882 TTGTGC T 3669 3619.76 0.054 7 516 INDEL chr4 53753231 G GGAAGAAA 4558 6628.64 0.106 8 516 INDEL chr4 54475969 TGGAAGAA T 4378 27071.2 0.069 3 520 INDEL chr4 54490550 T TGGTGGTGGC 3081 1608.35 0.055 1 514 INDEL chr4 56337491 CCAAATTCTTA C 3506 23216.4 0.055 0 516 INDEL chr4 56510809 G GTACCTAA 3262 6765.24 0.057 0 516 INDEL chr4 56525011 G GTAACTGCT 2880 20467 0.104 1 516 INDEL chr4 56525025 G GCCTAACA 2984 1597 0.064 0 520 INDEL chr5 22704 GCTGTGGC G 2868 8675.42 0.073 1 514 INDEL chr5 161751 C CTGCTTCACA 6146 5771.02 0.076 1 520 INDEL chr5 179771 CTGAAGG C 5530 6404.86 0.054 1 518 INDEL chr5 230406 CTTAATTGTA C 2612 9906.99 0.062 1 516 INDEL chr5 588031 T TTATCC 3992 6255.47 0.082 19 518 INDEL chr5 595780 AGAACACGAT A 3262 13561.1 0.061 1 518 INDEL chr5 697391 GTTGTGTTGTTGGTGTCGT G 4558 31038.5 0.086 53 516 INDEL chr5 697393 T TGTGTTGGTC 4565 15021.2 0.052 1 514 INDEL chr5 697398 TGTTGGTGTC T 4673 10511 0.072 40 518 INDEL chr5 1525632 GAGTTGGGAA G 3085 2383.63 0.051 1 514 INDEL chr5 2223207 AGTGAAGGAGGGTAGG A 4350 34495 0.066 38 514 INDEL chr5 2361450 ACCGTTGCCG A 2656 12026.6 0.072 2 518 INDEL chr5 2408194 ACCCCT A 2979 3579.91 0.051 0 516 INDEL chr5 2495716 G GGTTGTA 2976 15257.6 0.143 43 514 INDEL chr5 2495718 T TTGTAGTTG 2933 5752.47 0.117 39 514 INDEL chr5 4399836 CCACAA C 5041 12138.8 0.061 19 516 INDEL chr5 6354417 TAGTCC T 2466 994.68 0.052 6 514 INDEL chr5 7285716 GTCTATGA G 9381 6177.42 0.056 9 518 INDEL chr5 7449849 TGAAAAATGTGG T 4684 46751.8 0.071 1 518 INDEL chr5 8387716 ATTTTG A 3157 2252.38 0.092 5 514 INDEL chr5 8387720 TGTTTTA T 3172 2276.46 0.091 8 514 INDEL chr5 8504947 AGTTGTCGGT A 7971 14029.1 0.055 19 522 INDEL chr5 9077961 TCTTCA T 5261 13875.3 0.082 10 514 INDEL chr5 9173172 TTGGTGTTAGACACATACAC T 4855 47070 0.071 30 514 INDEL chr5 9466230 TGTGCACA T 3463 225737 0.91 466 514 INDEL chr5 9952221 G GCATAGCTTC 3724 28356.1 0.116 2 514 INDEL chr5 11806321 AGCCGACGAGTGGCGAAAGTAAAGACGAC A 9011 1459.38 0.065 13 518 INDEL chr5 13870552 AAAGGACGCC A 3679 28544.8 0.088 50 514 INDEL chr5 15001506 GCTTGAGTA G 8317 1573.95 0.091 13 514 INDEL chr5 15699432 ATCATC A 2868 5876.82 0.054 5 516 INDEL chr5 15699435 ATCATCAT A 2869 10767.1 0.078 5 516 INDEL chr5 15699440 CATTCATCATCA C 2870 2369.31 0.071 4 516 INDEL chr5 15951962 T TATTACC 2787 3398.59 0.053 2 516 INDEL chr5 16023612 AAAGAT A 3105 14004.4 0.061 36 514 INDEL chr5 17214079 TATGTTGAGTCTG T 2839 19245.6 0.113 64 514 INDEL chr5 17874871 TTGACAAC T 3760 2083.27 0.062 12 514 INDEL chr5 18269480 TGTGTGCGC T 4372 5436.27 0.05 17 514 INDEL chr5 18269489 GTGTGCGCA G 4566 3888.6 0.051 15 520 INDEL chr5 18752716 A AGTGTTT 2678 1285.97 0.11 14 514 INDEL chr5 18965726 CAGAGATG C 3031 18929.7 0.129 72 514 INDEL chr5 19262661 GGACAGGAGGCTTAACAAT G 3126 10369.2 0.147 25 514 INDEL chr5 19592728 A AATGTGCTGG 4099 23651 0.201 78 520 INDEL chr5 19592935 ATGCGGG A 3063 971.3 0.05 0 516 INDEL chr5 21993070 GCGGAC G 10170 1232.49 0.051 13 514 INDEL chr5 22125010 TGTTGAATTGTTCATC T 3014 15561.7 0.066 37 514 INDEL chr5 22127469 AGAGGTAGATAACTCAGAGGCACAACAT A 6048 7201.7 0.155 16 516 INDEL chr5 22523197 ATAGCATGGCAGGTT A 2603 16123 0.053 1 514 INDEL chr5 22525918 CCCTCAACTT C 4866 24858.4 0.073 1 518 INDEL chr5 22687558 CAACAACAGA C 4459 9267.39 0.055 3 516 INDEL chr5 22687566 GAAACAACAC G 4285 12118.1 0.058 2 516 INDEL chr5 22687576 AAACAACACAACATG A 4185 6788.33 0.062 1 516 INDEL chr5 23726848 ATGAATGAATG A 4854 1773.87 0.053 11 514 INDEL chr5 24019933 ATTAAC A 17989 3355.85 0.059 12 520 INDEL chr5 24136718 GGTTTGGTTCAATTT G 2822 23612.6 0.076 42 514 INDEL chr5 24136736 TGGTTGTTG T 2874 6704.08 0.058 28 516 INDEL chr5 24458188 GTAGGT G 4216 33132.1 0.107 60 514 INDEL chr5 24843551 A AAGTCAGTT 2951 12287.8 0.157 56 516 INDEL chr5 25341260 TCTGTTG T 4595 15973.3 0.087 51 520 INDEL chr5 25502466 ATCGCAGG A 5311 5164.44 0.051 12 516 INDEL chr5 26871805 TTAAAGACCAAGATAGAGGAATTGGAGTCTA T 11210 2654.14 0.114 10 516 INDEL chr5 27614551 AACATAAC A 12964 1081.84 0.052 4 522 INDEL chr5 27779043 ACTAAG A 9053 7155.51 0.074 15 520 INDEL chr5 28382176 CACCACCGTTATT C 3324 1143.28 0.05 3 514 INDEL chr5 29842230 AACAGCTAAGAATATTGCAAACCCG A 2743 26650.4 0.066 39 514 INDEL chr5 31743507 AAGTCCCTCATCGAGTTGT A 2726 20353.9 0.055 2 514 INDEL chr5 32337153 CAACAAT C 2968 18462.7 0.088 53 518 INDEL chr5 32413980 GTCATGACA G 6348 10751.4 0.104 33 518 INDEL chr5 32426294 CAACAACAAT C 3694 11083.4 0.157 38 514 INDEL chr5 32893401 TATGTA T 2961 12231.4 0.064 2 514 INDEL chr5 34897981 ATTTCCATCACCTCCATCAT A 3753 19523 0.053 31 514 INDEL chr5 34937686 TAATAATC T 7332 1665.52 0.056 14 518 INDEL chr5 36435803 GCACCATGAC G 5902 19543.8 0.067 26 514 INDEL chr5 36602323 G GCAACTA 3722 4708.45 0.073 0 516 INDEL chr5 37102056 GATAAA G 3279 7976.92 0.066 4 514 INDEL chr5 37486770 GTAGCACATAAA G 3820 42755.1 0.078 44 516 INDEL chr5 37984955 C CATAGCTT 3539 7594.77 0.068 1 514 INDEL chr5 37984956 A ATAACTTC 3539 14838.4 0.07 2 514 INDEL chr5 38253094 T TCTTCAC 3891 17190.9 0.056 3 520 INDEL chr5 38562581 ACGGTAC A 6318 5420.88 0.101 24 518 INDEL chr5 39242275 TGATAC T 3086 14808.3 0.092 50 514 INDEL chr5 42371582 GTGTGCGCA G 3464 6023.98 0.05 0 516 INDEL chr6 322753 G GCACTGACA 2984 12212.2 0.073 0 514 INDEL chr6 1031760 CACTTGCGCATCTTA C 4004 31979.4 0.081 25 518 INDEL chr6 1031769 ATCTTAACTTGCGCAT A 3874 28847.6 0.077 25 520 INDEL chr6 1031771 CTTAACTTGCGCATT C 3800 33199.3 0.088 25 518 INDEL chr6 1596769 A AAAAAGC 12637 4609.82 0.05 13 524 INDEL chr6 1597106 TCAGAGTTCAG T 7066 2401.41 0.052 13 518 INDEL chr6 1639001 C CGACAAATGT 5316 9577.46 0.107 13 514 INDEL chr6 2135911 G GATGGA 3100 20809.3 0.139 32 514 INDEL chr6 2288491 AGATGGAGTTGTTGTAATTGTTGTTGTC A 7931 1710.17 0.095 14 514 INDEL chr6 2826819 C CCGAGGAGGA 3329 1698.87 0.054 2 514 INDEL chr6 3382203 GGAGGATCTA G 3232 71516.9 0.311 165 516 INDEL chr6 3972758 ACCATATCCTGAC A 4450 19307.7 0.069 27 516 INDEL chr6 7519795 CTTCTA C 3595 15438 0.084 45 516 INDEL chr6 7556673 CTGTGTGTGGCTGGA C 3336 13906.5 0.05 22 516 INDEL chr6 7815146 TCTATATCAACAAAACGAAATAAA T 34045 295980 0.067 13 516 INDEL chr6 7942313 TGTGTCGGACACTGACAC T 3500 36647.8 0.066 38 514 INDEL chr6 7942319 GGACACTGACACGTGTCGGACACCAC G 3479 20795.8 0.059 36 514 INDEL chr6 7942336 GGACACCAC G 3398 25335.9 0.111 24 514 INDEL chr6 8155959 GTGACAC G 2760 10943.4 0.087 50 518 INDEL chr6 10536228 TTAATTGAATGTAATTA T 3724 44896.3 0.065 4 516 INDEL chr6 10623622 TGTCAC T 3110 4364.78 0.059 8 514 INDEL chr6 14347966 AACACGAACAACAGAAACACC A 3324 30183 0.066 38 516 INDEL chr6 16476854 AACTAATAGAGT A 40239 84179.5 0.053 4 522 INDEL chr6 16739428 ATTCTT A 9030 2399.99 0.083 4 516 INDEL chr6 17422335 AGTCATTG A 3314 37571.2 0.208 121 514 INDEL chr6 19339386 A AAGCCC 3262 9027.85 0.197 36 514 INDEL chr6 19406616 TTCCGGCCACCATAATTCTTGC T 2325 30389.2 0.062 33 514 INDEL chr6 20046444 TTGTTTTAGTTTTA T 7199 3050.65 0.062 6 518 INDEL chr6 20640570 C CTTCATA 33326 5447.37 0.076 12 524 INDEL chr6 20640794 C CTTCATA 12699 2949.43 0.054 5 516 INDEL chr6 24684553 GTCATA G 36240 29698.6 0.058 1 524 INDEL chr6 25959003 A AAGGCTC 6422 1514.15 0.077 7 518 INDEL chr6 26336686 TCGGCTTACCTTTTGGAGGACCAGTTGTTA T 4740 2981.84 0.052 8 518 INDEL chr6 31787237 TCCTGTC T 4119 13562.3 0.108 19 522 INDEL chr6 32292916 CGTGCAGGT C 3595 14977.2 0.071 40 516 INDEL chr6 32391297 GTTGCA G 3454 7368.78 0.053 29 514 INDEL chr6 33981441 TGAAAA T 3707 39625.1 0.217 129 516 INDEL chr6 34963120 ACAATG A 12862 1899.29 0.07 7 524 INDEL chr6 35171264 GGCCATCTTC G 2944 26208.7 0.104 63 514 INDEL chr7 536553 T TCTCCAGAG 12689 17916.8 0.066 16 520 INDEL chr7 536573 TCCAGAGTCAGCA T 13214 10555.5 0.075 14 520 INDEL chr7 536574 CCAGAGTCAG C 13301 19158 0.071 15 520 INDEL chr7 536580 TCAGCAC T 13749 6031.29 0.075 16 516 INDEL chr7 1542889 T TTCATAA 4729 4277.9 0.06 15 514 INDEL chr7 2279647 GCTCGCCTCGCGAGCAACTTCTT G 3899 14390.7 0.069 17 514 INDEL chr7 2831882 GCTCGCCACGCGAGCAACCTTTC G 6717 10347.1 0.083 13 516 INDEL chr7 3271527 ACATCATAG A 8556 1926.3 0.052 13 522 INDEL chr7 3661484 GGTGGTT G 4945 45572.1 0.161 52 518 INDEL chr7 6941709 G GAACTTAAT 42039 173145 0.077 0 524 INDEL chr7 6941712 C CTTAATAAA 43720 112071 0.061 0 524 INDEL chr7 8590016 AGGAAGCCCACGAGGTGCACG A 2854 28421.9 0.055 33 514 INDEL chr7 10194166 T TGCATC 4485 10505.7 0.073 3 514 INDEL chr7 10552631 AGTGTTATGAGTCTAATAGTACT A 3523 8905.17 0.102 11 514 INDEL chr7 13255266 CCAACAACGACGACAA C 7122 15203 0.052 12 520 INDEL chr7 13865554 G GTGTTGT 3514 2319.23 0.08 5 518 INDEL chr7 14348831 A AAACAC 6744 1028.51 0.054 11 516 INDEL chr7 14416408 GTTGTCTATGT G 26991 6771.72 0.068 8 524 INDEL chr7 14679832 AATGAAGTC A 3018 16134.6 0.051 29 516 INDEL chr7 15059335 TTAGAGTGTCTGTGTC T 2785 21283.1 0.062 33 514 INDEL chr7 15155682 CGCCACG C 6145 2142.88 0.076 12 520 INDEL chr7 15166487 AACAACG A 5926 3967.96 0.052 8 520 INDEL chr7 15888179 TCAGAAG T 14648 6939.21 0.076 13 524 INDEL chr7 15914139 GTGGTTATGAGTGAT G 3633 11870.7 0.062 21 514 INDEL chr7 16266339 G GGAAATT 10770 1356.13 0.07 11 522 INDEL chr7 17905888 TCCAACAGA T 3650 15517 0.061 36 514 INDEL chr7 19649962 GCTTATGTTGAAGA G 9023 4047.55 0.053 11 514 INDEL chr7 21161409 GTGTGA G 3411 5182.36 0.059 0 518 INDEL chr7 23665016 AATGTTGTGGG A 16635 3961.18 0.054 11 520 INDEL chr7 23942252 CACATT C 3453 1750.82 0.089 10 516 INDEL chr7 25619572 GAACATGTACAT G 2820 23601.5 0.104 59 520 INDEL chr7 25619573 AACATGT A 2809 10667.5 0.12 61 518 INDEL chr7 26386304 CATCCAA C 3132 1575.85 0.099 3 514 INDEL chr7 26799107 T TCCCCAATC 2614 18147.1 0.097 29 514 INDEL chr7 27013689 GAGAAACATAATGGACGGA G 2476 7358.16 0.051 0 516 INDEL chr7 27322826 TACCACC T 2680 12698.2 0.075 0 514 INDEL chr7 27322855 C CACGCACA 3137 8210.75 0.074 0 520 INDEL chr7 27360401 AAGTGGTAT A 2805 12428.9 0.05 0 518 INDEL chr7 27360402 AGTGGTATC A 2812 12429.6 0.05 0 518 INDEL chr7 27468402 C CTGCTGATGA 3121 31196.1 0.093 3 514 INDEL chr7 28614976 TATTCCTCCC T 2731 11817.2 0.056 2 514 INDEL chr7 28769250 CATATATTT C 3673 13345 0.068 27 514 INDEL chr7 28976853 G GCTGATT 4155 18334.9 0.111 1 514 INDEL chr7 30434323 T TCTGCGG 2870 10769.6 0.071 1 514 INDEL chr7 30516413 TGTCGACGTGTCA T 2874 25017.4 0.077 4 514 INDEL chr7 31339780 ACATTTAT A 2636 9188 0.054 33 518 INDEL chr7 31376491 TAATCGA T 2535 15019.5 0.062 0 514 INDEL chr7 31665134 CAAGATGATCTCGCGTAAGT C 3304 35346.6 0.053 0 518 INDEL chr7 32149879 CTCTCTGTTG C 2778 14565.3 0.156 52 514 INDEL chr7 32973966 AACAACAACC A 4982 22791.9 0.072 2 514 INDEL chr7 33471965 GTGTTT G 2752 18602.5 0.091 15 516 INDEL chr7 33471966 TGTTTC T 2746 12355.6 0.091 12 514 INDEL chr7 34217957 GTGTTATGCCAT G 3121 1387.08 0.05 3 516 INDEL chr7 35153473 GCAACAATCC G 4837 31884.7 0.06 1 516 INDEL chr7 35208598 TCAATA T 3025 28326.5 0.168 98 518 INDEL chr7 36247754 GACTATC G 3940 24787 0.068 29 514 INDEL chr7 36363927 A ACACCAACG 4606 258848 0.906 481 516 INDEL chr7 36881002 AAGGAG A 5377 1024.04 0.057 17 516 INDEL chr7 38983874 AGATCCTGCTTTG A 3352 25499.4 0.065 2 514 INDEL chr7 39483856 ATTTGTCATAC A 3848 41713.4 0.132 76 518 INDEL chr7 39944515 TCAAGTACAA T 4503 22600.1 0.06 8 514 INDEL chr7 39944517 AAGTACAACT A 4562 27962.9 0.08 7 514 INDEL chr7 40031330 ATGGGCTTGGATCGAAGAATT A 4020 33852.9 0.053 0 514 INDEL chr7 40544503 AACTAGTTGTAGT A 2929 40751.7 0.145 83 514 INDEL chr7 40817785 TATGAGG T 3755 43508.9 0.209 49 514 INDEL chr7 40817798 ATGAGGATGG A 3758 6804.54 0.145 28 516 INDEL chr7 40817804 ATGGGGG A 3762 9968.6 0.144 31 514 INDEL chr7 42515143 T TGGTTGA 4908 9539.3 0.07 10 518 INDEL chr7 43764903 G GAGCTC 2379 5585.26 0.055 0 516 INDEL chr7 44937882 AGGAGGTGCCGGT A 5993 36926.9 0.079 34 516 INDEL chr7 44937891 CGGTGGA C 5933 11914.2 0.052 25 516 INDEL chr7 45333985 A ACAGATC 3124 20912.5 0.113 3 514 INDEL chr7 46283264 C CGAAAGTCAG 4395 31087.6 0.084 2 514 INDEL chr7 46533206 CAAGTATTAGAG C 2774 8038.49 0.061 0 514 INDEL chr7 47404742 AAGCTGAGCTGAGCATTTTGAAGGGTCG A 9691 60718.4 0.082 39 516 INDEL chr7 47404849 C CGAGCT 10686 112472 0.24 137 520 INDEL chr7 47404862 GCTCAA G 10526 28484.1 0.064 6 524 INDEL chr7 47644213 TTTCTTTGATGTTCTAATC T 3658 22956.4 0.064 14 514 INDEL chr7 47687762 TGTATGTATTATCAATA T 3240 36687.9 0.063 0 516 INDEL chr7 48186962 T TTCTTC 5329 20131.8 0.064 1 518 INDEL chr7 48691769 TGATGATGAAC T 3613 2131.95 0.067 12 514 INDEL chr7 48743135 A ACAACTCTCT 5825 298.39 0.051 8 520 INDEL chr7 48992491 CTTCCACTGG C 2834 6958.32 0.056 2 516 INDEL chr7 49117902 CATACATG C 3319 29784.4 0.147 38 514 INDEL chr8 1347545 TACCTAAACTAAGCGACATCCAC T 2888 35021.5 0.059 3 514 INDEL chr8 7185186 GCAACAGCAA G 4838 1825.15 0.075 2 518 INDEL chr8 7250957 TACGGC T 3083 15100.4 0.071 0 514 INDEL chr8 9124556 GAACGTGATGTT G 3179 41175.9 0.156 81 514 INDEL chr8 10166122 TCCTCAGTGTCA T 3096 13656 0.105 8 514 INDEL chr8 10306481 CCATTCTCAT C 3616 9939.2 0.055 31 518 INDEL chr8 11277027 TTGATTGACTGCC T 4380 41440.4 0.06 1 516 INDEL chr8 11518083 TGTTGAC T 2389 8722.33 0.079 42 514 INDEL chr8 12528346 TCTCCATAC T 2934 33766.3 0.229 138 516 INDEL chr8 12528348 TCCATACAC T 2884 33628.8 0.227 138 516 INDEL chr8 12598742 CCAAAGACAA C 4117 13070.2 0.096 55 514 INDEL chr8 12640993 AGTTCGAGTT A 6551 1628.2 0.06 3 516 INDEL chr8 12909687 C CGTTGTT 3700 14134.8 0.094 16 514 INDEL chr8 14256375 TGCAGTCTCGGTCATGTCGGCTGTCTAGATC T 3670 54469.8 0.055 6 516 INDEL chr8 15091337 C CTGTTGAAG 5739 4050.06 0.092 10 516 INDEL chr8 15593897 TTGGACACC T 2912 8742.84 0.056 30 514 INDEL chr8 16215133 AGGAAGCTT A 2959 34597.8 0.131 73 518 INDEL chr8 16883266 T TATGATGAA 12167 2727.02 0.053 7 514 INDEL chr8 18155676 GGTTTGA G 6173 2695.43 0.059 13 516 INDEL chr8 18191729 TGTGAATCAA T 3889 15358 0.071 40 514 INDEL chr8 19260231 T TAACTGACTG 4792 2405.85 0.052 11 522 INDEL chr8 19796479 ATCTAGTGGGTTGAATAGTGGTGGT A 3061 53719.8 0.067 3 514 INDEL chr8 20519550 CAATTCAAA C 3688 12816.5 0.062 34 514 INDEL chr8 20695797 GTTCCAGCATCCGCTA G 3083 16774.8 0.05 23 516 INDEL chr8 21194505 GAAAAA G 5131 1159.16 0.05 2 514 INDEL chr8 22319119 TGTTGTTGCATTTTCAA T 3933 3412.74 0.068 16 518 INDEL chr8 22434766 AGGGCTTAT A 5668 19345.7 0.066 35 516 INDEL chr8 22434893 GGTTGA G 4930 6457.61 0.053 2 516 INDEL chr8 22921076 TGTGTCGTTGCATA T 4453 7122.42 0.056 11 518 INDEL chr8 24195922 GTCACACTCTTTAAGA G 3275 19371.2 0.094 5 514 INDEL chr8 26401092 CAAAGA C 5847 1225.91 0.061 9 518 INDEL chr8 26568053 CAGCTT C 4666 18331.2 0.089 46 516 INDEL chr8 27745467 A ACAACAACGC 5781 23000.8 0.108 14 516 INDEL chr8 28171016 ACGTTGCAGGC A 4619 38198.5 0.098 57 522 INDEL chr8 28469762 TGTGTCTAC T 2934 12955.5 0.075 30 518 INDEL chr8 29685537 T TGTGCGTGC 3177 3478.05 0.129 18 516 INDEL chr8 31756658 ATCGTATGCTG A 2481 17838.1 0.09 1 514 INDEL chr8 31756659 TCGTATGCTGTC T 2474 11322.7 0.06 1 514 INDEL chr8 31921986 GCAGGCC G 2432 28474.3 0.185 113 514 INDEL chr8 31921987 CAGGCCA C 2305 28455 0.185 112 514 INDEL chr8 32505756 C CAATAACA 3617 4092.12 0.075 0 516 INDEL chr8 32505765 C CAACAAT 3622 9236.21 0.104 0 516 INDEL chr8 32862305 C CTTGCAAGGG 4893 26142 0.069 40 514 INDEL chr8 33131359 A ATCTCGG 5190 9914.36 0.075 0 514 INDEL chr8 33131365 G GTCTCGA 5239 16614.8 0.103 2 514 INDEL chr8 33131368 T TCGGTCC 5257 16432.6 0.093 2 514 INDEL chr8 33666318 TCCAACAGACATTTTTTATTTTTTG T 2823 48409.1 0.063 2 514 INDEL chr8 34163679 CGTGCGT C 2970 3211.89 0.063 16 516 INDEL chr8 34184319 CCTAAATCTAATGGTCCT C 4251 39256 0.083 47 518 INDEL chr8 34877444 TTGGAAGAGA T 3189 8083.05 0.063 1 514 INDEL chr8 34877453 ATGGAGG A 3212 8049.38 0.07 1 514 INDEL chr8 35797907 A ATTGCT 3026 8279.71 0.065 1 514 INDEL chr8 36072195 TCATCTCATGCTGCACCTTCTAGTA T 8143 33262.7 0.052 29 518 INDEL chr8 36405914 CTAAGTTGTTGAAGTCGTA C 5834 3652.84 0.056 11 520 INDEL chr8 36831016 TTGTGCTGTTTGAC T 2722 36242.8 0.109 30 516 INDEL chr8 38031654 TTGGCAA T 2650 19309 0.145 83 516 INDEL chr8 38186263 AGAGAG A 3662 944.57 0.077 16 520 INDEL chr8 38653005 TAGGATC T 2410 13735.5 0.12 5 514 INDEL chr8 40233666 G GTATCAT 2815 16636.2 0.085 1 514 INDEL chr8 40474380 CTTTCCGGCGACA C 3499 30790.3 0.065 18 516 INDEL chr8 40475154 TAGTGTG T 2696 781.44 0.055 2 516 INDEL chr8 41512669 G GTCGAGAA 3120 16442.3 0.061 1 518 INDEL chr8 42278676 G GTCACCTA 5615 12355.2 0.082 5 520 INDEL chr8 43502878 C CAGTGT 4123 82869.6 0.581 316 516 INDEL chr8 43635305 TTGTGCTAGTG T 2881 8532.8 0.089 14 514 INDEL chr8 43647733 TCCACCAACGCCGGGAACGGTG T 4754 52815.5 0.068 2 514 INDEL chr8 43946139 CCATCAAAGCCTAT C 3264 3720.83 0.053 0 514 INDEL chr8 44547237 ACCAATGCATGTTCCT A 4146 70339.2 0.118 68 518 INDEL chr8 44805818 CTCTCTCTCTT C 3400 10293.2 0.113 35 514 INDEL chr8 44884715 GATGGAGGGT G 3252 18344.8 0.147 29 514 INDEL chr8 44884716 ATGGAGGGTG A 3213 11078.8 0.107 4 514 INDEL chr8 45349818 T TTTTGTTC 6708 2319.76 0.063 5 522 INDEL chr8 45471616 TTGTTGTCA T 3944 10024.7 0.087 32 516 INDEL chr8 45471617 TGTTGTCAA T 3952 15415.1 0.106 39 516 INDEL chr8 45471623 CAAGTTG C 3817 9816.95 0.086 28 516 INDEL